RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 OR5AR1Q8NGP9 310 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 INPP5DQ92835 1189 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 FKBP10Q96AY3 582 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 MOCOSQ96EN8 888 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 DNAJC1Q96KC8 554 aaKnown RBP15.41■□□□□ 0.06
VCX3A-201ENST00000381089 AGAP4Q96P64 663 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 NRTNQ99748 197 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 EPS8L2Q9H6S3 715 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 SMARCAL1Q9NZC9 954 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 CDC23Q9UJX2 597 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 CCDC88CQ9P219 2028 aa15.41■□□□□ 0.06
VCX3A-201ENST00000381089 FER1L5A0AVI2 2057 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 LRBAP50851 2863 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 H7C0S8 307 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 CCL22O00626 93 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 KCNN4O15554 427 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 HNRNPRO43390 633 aaKnown RBP15.4■□□□□ 0.06
VCX3A-201ENST00000381089 ALAS2P22557 587 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 MMP11P24347 488 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 NSG1P42857 185 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 GABRA4P48169 554 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 OTUD4Q01804 1114 aaKnown RBP15.4■□□□□ 0.06
VCX3A-201ENST00000381089 CACNG1Q06432 222 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 KIR2DS3Q14952 304 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 ZIC1Q15915 447 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 SLC5A12Q1EHB4 618 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 C1QL3Q5VWW1 255 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 DARS2Q6PI48 645 aaKnown RBP15.4■□□□□ 0.06
VCX3A-201ENST00000381089 CNGA4Q8IV77 575 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 CLDN19Q8N6F1 224 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 OR5K2Q8NHB8 316 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 DNAJB14Q8TBM8 379 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 ACTL9Q8TC94 416 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 ELMO1Q92556 727 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 SPATA13Q96N96 652 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 RUBCNLQ9H714 662 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 C10orf88Q9H8K7 445 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 ARNT2Q9HBZ2 717 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 MRM3Q9HC36 420 aaKnown RBP15.4■□□□□ 0.06
VCX3A-201ENST00000381089 FBXL4Q9UKA2 621 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 NOVA2Q9UNW9 492 aaKnown RBP15.4■□□□□ 0.06
VCX3A-201ENST00000381089 ABCA12Q86UK0 2595 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 ANKRD12Q6UB98 2062 aa15.4■□□□□ 0.06
VCX3A-201ENST00000381089 DIDO1Q9BTC0 2240 aaKnown RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 A0A1B0GX78 115 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 CCDC78A2IDD5 438 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 AKR1B15C9JRZ8 316 aaPredicted RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 LRRTM2O43300 516 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 AP2A1O95782 977 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 ALBP02768 609 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 UMODP07911 640 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 RBP3P10745 1247 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 EDN3P14138 238 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 CDC25BP30305 580 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 CETN2P41208 172 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 MAGEA1P43355 309 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 TSFMP43897 325 aaKnown RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 CDKN1CP49918 316 aaPredicted RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 EIF3EP60228 445 aaKnown RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 CDC16Q13042 620 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 TBX2Q13207 712 aaPredicted RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 MSLNQ13421 630 aaPredicted RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 ITIH4Q14624 930 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 B3GNTL1Q67FW5 361 aaPredicted RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 C11orf63Q6NUN7 778 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 KCNMB4Q86W47 210 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 DNAJC22Q8N4W6 341 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 SLC22A18Q96BI1 424 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 CNDP1Q96KN2 507 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 GOLPH3Q9H4A6 298 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 WDR54Q9H977 334 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 ZBTB20Q9HC78 741 aaPredicted RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 SLC6A20Q9NP91 592 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 LUC7LQ9NQ29 371 aaKnown RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 INTS7Q9NVH2 962 aaKnown RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 NLE1Q9NVX2 485 aaPredicted RBP15.39■□□□□ 0.05
VCX3A-201ENST00000381089 SPHK1Q9NYA1 384 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 OSGIN2Q9Y236 505 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 EFR3BQ9Y2G0 817 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 NTNG1Q9Y2I2 539 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 PCM1Q15154 2024 aa15.39■□□□□ 0.05
VCX3A-201ENST00000381089 HCRTR1O43613 425 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 CNOT3O75175 753 aaKnown RBP15.38■□□□□ 0.05
VCX3A-201ENST00000381089 RPN2P04844 631 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 OR56A5P0C7T3 313 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 ITGAXP20702 1163 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 ELAVL4P26378 380 aaKnown RBP15.38■□□□□ 0.05
VCX3A-201ENST00000381089 ACADLP28330 430 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 MARCKSL1P49006 195 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 SPARCL1Q14515 664 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 ZNF169Q14929 603 aaPredicted RBP15.38■□□□□ 0.05
VCX3A-201ENST00000381089 BRD3Q15059 726 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 TLR1Q15399 786 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 DBN1Q16643 649 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 HIF1AQ16665 826 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 YOD1Q5VVQ6 348 aaPredicted RBP15.38■□□□□ 0.05
VCX3A-201ENST00000381089 FCRL6Q6DN72 434 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 DENND5AQ6IQ26 1287 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 FAM180AQ6UWF9 173 aa15.38■□□□□ 0.05
VCX3A-201ENST00000381089 TTLL10Q6ZVT0 673 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms