RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 KLHL42Q9P2K6 505 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 IL17BQ9UHF5 180 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 MAD1L1Q9Y6D9 718 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 MYO18BQ8IUG5 2567 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TLN1Q9Y490 2541 aaKnown RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 PIPSLA2A3N6 862 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 SLC9B1P1A6NJY1 282 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TERTO14746 1132 aaKnown RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 KDM1AO60341 852 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TIAF1O95411 115 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 RPN2P04844 631 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 CHRM5P08912 532 aaPredicted RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 ST6GAL1P15907 406 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 PEBP1P30086 187 aaKnown RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 PKLRP30613 574 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 SLC1A2P43004 574 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 RAB28P51157 221 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 CLCN7P51798 805 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TUBB4BP68371 445 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 CTBP1Q13363 440 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TUBB2AQ13885 445 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 ZNF549Q6P9A3 640 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 FBXO38Q6PIJ6 1188 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 SPESP1Q6UW49 350 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 IGDCC3Q8IVU1 814 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 CNTN4Q8IWV2 1026 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 OTUD6BQ8N6M0 293 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 LINC01555Q8NAE3 123 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 OR8K5Q8NH50 307 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 LRRC39Q96DD0 335 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 WDR83Q9BRX9 315 aaKnown RBP16.45■□□□□ 0.22
RER1-202ENST00000378512 TRIM51Q9BSJ1 452 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TUBB2BQ9BVA1 445 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 ULBP3Q9BZM4 244 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 FAM117AQ9C073 453 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 GALPQ9UBC7 116 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 RARRES3Q9UL19 164 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 TEX264Q9Y6I9 313 aa16.45■□□□□ 0.22
RER1-202ENST00000378512 PCM1Q15154 2024 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 GSAPA4D1B5 854 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 BANF1O75531 89 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 C1orf105O95561 183 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 PRKAR1AP10644 381 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 CDH3P22223 829 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 STAT5AP42229 794 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 THOC5Q13769 683 aaKnown RBP16.44■□□□□ 0.22
RER1-202ENST00000378512 SPANXN3Q5MJ09 141 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 ATP1A1-AS1Q5TC04 95 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 PWWP2BQ6NUJ5 590 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 ZNF572Q7Z3I7 529 aaPredicted RBP16.44■□□□□ 0.22
RER1-202ENST00000378512 GALNT7Q86SF2 657 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 RASGRP3Q8IV61 690 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 ESX1Q8N693 406 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 SPATA4Q8NEY3 305 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 KCNJ9Q92806 393 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 SNF8Q96H20 258 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 C20orf96Q9NUD7 363 aaPredicted RBP16.44■□□□□ 0.22
RER1-202ENST00000378512 SPHK1Q9NYA1 384 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 FBXO5Q9UKT4 447 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 TDRKHQ9Y2W6 561 aaKnown RBP16.44■□□□□ 0.22
RER1-202ENST00000378512 COMMD10Q9Y6G5 202 aa16.44■□□□□ 0.22
RER1-202ENST00000378512 FER1L5A0AVI2 2057 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 PRICKLE3O43900 615 aaPredicted RBP16.43■□□□□ 0.22
RER1-202ENST00000378512 KIAA0754O94854 1291 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 UGT2B7P16662 529 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 GABRA4P48169 554 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 ITGA8P53708 1063 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 ABRQ12979 859 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 FRG1Q14331 258 aaKnown RBP16.43■□□□□ 0.22
RER1-202ENST00000378512 KIR2DS3Q14952 304 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 SLC5A12Q1EHB4 618 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 CRTC2Q53ET0 693 aaPredicted RBP16.43■□□□□ 0.22
RER1-202ENST00000378512 HSP90AA5PQ58FG0 334 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 TMTC4Q5T4D3 741 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 STEAP4Q687X5 459 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 ZNF517Q6ZMY9 492 aaPredicted RBP16.43■□□□□ 0.22
RER1-202ENST00000378512 NEK10Q6ZWH5 1172 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 KCNMB4Q86W47 210 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 PDIK1LQ8N165 341 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 C2CD4AQ8NCU7 369 aaPredicted RBP16.43■□□□□ 0.22
RER1-202ENST00000378512 HMGCLL1Q8TB92 370 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 ELMO2Q96JJ3 720 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 SLC45A3Q96JT2 553 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 KRT12Q99456 494 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 FAM167BQ9BTA0 163 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 FBXO6Q9NRD1 293 aaPredicted RBP16.43■□□□□ 0.22
RER1-202ENST00000378512 PLAGL1Q9UM63 463 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 MRFAP1Q9Y605 127 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 MRPS18BQ9Y676 258 aaKnown RBP16.43■□□□□ 0.22
RER1-202ENST00000378512 NFS1Q9Y697 457 aa16.43■□□□□ 0.22
RER1-202ENST00000378512 E7ESA3 106 aa16.42■□□□□ 0.22
RER1-202ENST00000378512 H3BMH7 237 aa16.42■□□□□ 0.22
RER1-202ENST00000378512 RASGRF2O14827 1237 aa16.42■□□□□ 0.22
RER1-202ENST00000378512 HAUS5O94927 633 aa16.42■□□□□ 0.22
RER1-202ENST00000378512 CD9P21926 228 aa16.42■□□□□ 0.22
RER1-202ENST00000378512 F8A1P23610 371 aa16.42■□□□□ 0.22
RER1-202ENST00000378512 CASQ1P31415 396 aa16.42■□□□□ 0.22
RER1-202ENST00000378512 RPL21P46778 160 aaKnown RBP16.42■□□□□ 0.22
RER1-202ENST00000378512 ARL4DP49703 201 aa16.42■□□□□ 0.22
RER1-202ENST00000378512 POLE2P56282 527 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms