RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 CREB5Q02930 508 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 ABHD18Q0P651 414 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 SERINC3Q13530 473 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 FUT10Q6P4F1 479 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 LYSMD3Q7Z3D4 306 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 RAVER1Q8IY67 606 aaKnown RBP16.47■□□□□ 0.23
VARS-215ENST00000375663 ACVR1CQ8NER5 493 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 ANKRD49Q8WVL7 239 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 PYURFQ96I23 114 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 MYRFLQ96LU7 910 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 POPDC3Q9HBV1 291 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 ASF1AQ9Y294 204 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 COL18A1P39060 1754 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 ITGB4P16144 1822 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 TRAV19A0A0A6YYK7 116 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 DFNA5O60443 496 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 PRKAR1AP10644 381 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 CAPN3P20807 821 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 VBP1P61758 197 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 PMS2P3Q13401 168 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 PTGR1Q14914 329 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 ZNF789Q5FWF6 425 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 SNX20Q7Z614 316 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 ZNF597Q96LX8 424 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 CCSER2Q9H7U1 834 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 USP54Q70EL1 1684 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 PRSS51A0A1B0GVH4 220 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 SNX4O95219 450 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 CCNDBP1O95273 360 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 ENGP17813 658 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 FPR1P21462 350 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 TIE1P35590 1138 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 GPR1P46091 355 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 TXNL4AP83876 142 aaKnown RBP16.47■□□□□ 0.23
VARS-215ENST00000375663 GPAT3Q53EU6 434 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 RAET1GQ6H3X3 334 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 SYVN1Q86TM6 617 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 ZNF671Q8TAW3 534 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 TIFAQ96CG3 184 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 RANBP9Q96S59 729 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 TMEM248Q9NWD8 314 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 GULP1Q9UBP9 304 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 DDX60Q8IY21 1712 aaKnown RBP16.47■□□□□ 0.23
VARS-215ENST00000375663 PLOD3O60568 738 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 ANXA8P13928 327 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 NUDT6P53370 316 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 MYBPC3Q14896 1274 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 RANBP10Q6VN20 620 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 NEK10Q6ZWH5 1172 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 CDH24Q86UP0 819 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 TEX47Q8TBZ9 253 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 CNPPD1Q9BV87 410 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 ARVCFO00192 962 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 JUNP05412 331 aaKnown RBP16.46■□□□□ 0.23
VARS-215ENST00000375663 CHRM5P08912 532 aaPredicted RBP16.46■□□□□ 0.23
VARS-215ENST00000375663 ALPIP09923 528 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 CCT3P49368 545 aaKnown RBP16.46■□□□□ 0.23
VARS-215ENST00000375663 DSC3Q14574 896 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 CES5AQ6NT32 575 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 OR10G2Q8NGC3 310 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 XAGE5Q8WWM1 108 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 PIK3R3Q92569 461 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 LRCH3Q96II8 777 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 ZNF641Q96N77 438 aaPredicted RBP16.46■□□□□ 0.23
VARS-215ENST00000375663 ZNF347Q96SE7 839 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 ZNF382Q96SR6 550 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 MOV10Q9HCE1 1003 aaKnown RBP16.46■□□□□ 0.23
VARS-215ENST00000375663 ARMC1Q9NVT9 282 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 ING3Q9NXR8 418 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 SCML2Q9UQR0 700 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 H3BM21 787 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 ONECUT3O60422 494 aaPredicted RBP16.46■□□□□ 0.23
VARS-215ENST00000375663 GUCY1B2O75343 617 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 UGT2B17O75795 530 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 GABRR2P28476 465 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 CASP9P55211 416 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 STX4Q12846 297 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 NFATC3Q12968 1075 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 ZNF792Q3KQV3 632 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 KCNJ9Q92806 393 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 COL26A1Q96A83 441 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 KCNC2Q96PR1 638 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 GKN1Q9NS71 199 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 SESN1Q9Y6P5 492 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 PHLPP1O60346 1717 aa16.46■□□□□ 0.23
VARS-215ENST00000375663 CCNB2O95067 398 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 C8GP07360 202 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 PRKAR2AP13861 404 aaKnown RBP16.46■□□□□ 0.22
VARS-215ENST00000375663 CENPAP49450 140 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 GALNT1Q10472 559 aaPredicted RBP16.46■□□□□ 0.22
VARS-215ENST00000375663 VN1R5Q7Z5H4 357 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 TRIM48Q8IWZ4 208 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 UMODL1-AS1Q8N2C9 162 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 CLIP4Q8N3C7 705 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 UXS1Q8NBZ7 420 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 USP7Q93009 1102 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 FAM83DQ9H4H8 585 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 CD84Q9UIB8 345 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 PCDHB3Q9Y5E6 796 aa16.46■□□□□ 0.22
VARS-215ENST00000375663 PCDHGA11Q9Y5H2 935 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms