RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 ZFP3Q96NJ6 502 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 TBC1D14Q9P2M4 693 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 ALPPP05187 535 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 HDCP19113 662 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 TGFB2P61812 414 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 GALNT13Q8IUC8 556 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 PRELID2Q8N945 189 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 OR52J3Q8NH60 311 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 PREBQ9HCU5 417 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 SNTG1Q9NSN8 517 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 ARL8BQ9NVJ2 186 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 COL1A2P08123 1366 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 CD36P16671 472 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 HNRNPFP52597 415 aaKnown RBP8.23□□□□□ -1.09
HSPG2-203ENST00000374695 MXD1Q05195 221 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 ZC3H12AQ5D1E8 599 aaKnown RBP8.23□□□□□ -1.09
HSPG2-203ENST00000374695 ZNF627Q7L945 461 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 POLR2J2Q9GZM3 115 aaKnown RBP8.23□□□□□ -1.09
HSPG2-203ENST00000374695 SLC5A7Q9GZV3 580 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 BRD7Q9NPI1 651 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 ELOVL2Q9NXB9 296 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 ERVW-1Q9UQF0 538 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 TPPPO94811 219 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 ZBTB7AO95365 584 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 TRIM23P36406 574 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 AQP4P55087 323 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 OGFOD2Q6N063 350 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 DUS1LQ6P1R4 473 aaKnown RBP8.23□□□□□ -1.09
HSPG2-203ENST00000374695 SLC30A10Q6XR72 485 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 NOP16Q9Y3C1 178 aaKnown RBP8.23□□□□□ -1.09
HSPG2-203ENST00000374695 DICER1Q9UPY3 1922 aaKnown RBP8.23□□□□□ -1.09
HSPG2-203ENST00000374695 PRR36Q9H6K5 1346 aa8.23□□□□□ -1.09
HSPG2-203ENST00000374695 S100A10P60903 97 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 TARDBPQ13148 414 aaKnown RBP eCLIP8.22□□□□□ -1.091e-6■■■■■ 29
HSPG2-203ENST00000374695 TPGS1Q6ZTW0 290 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 CHERPQ8IWX8 916 aaKnown RBP8.22□□□□□ -1.09
HSPG2-203ENST00000374695 LIX1Q8N485 282 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 LPIN3Q9BQK8 851 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 FUZQ9BT04 418 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 FAM53CQ9NYF3 392 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 RCBTB2O95199 551 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 NT5EP21589 574 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 CTBP1Q13363 440 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 NPNTQ6UXI9 565 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 XAGE5Q8WWM1 108 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 MSRAQ9UJ68 235 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 RGPD8O14715 1765 aaPredicted RBP8.22□□□□□ -1.09
HSPG2-203ENST00000374695 AGLP35573 1532 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 FAM234BA2RU67 622 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 OR6C75A6NL08 312 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 NDST3O95803 873 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 CCKBRP32239 447 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 HERV-K104P61576 105 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 C3orf33Q6P1S2 294 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 SLC37A3Q8NCC5 494 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 PDGFDQ9GZP0 370 aaPredicted RBP8.22□□□□□ -1.09
HSPG2-203ENST00000374695 GJA9P57773 515 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 SPIN3Q5JUX0 258 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 PRPF38BQ5VTL8 546 aaKnown RBP8.22□□□□□ -1.09
HSPG2-203ENST00000374695 AZIN2Q96A70 460 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 KLHL15Q96M94 604 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 USP29Q9HBJ7 922 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 SLCO1B3Q9NPD5 702 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 PCDHB9Q9Y5E1 797 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 ANKRD31Q8N7Z5 1873 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 FXYD6-FXYD2A0A087WZ82 144 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 CXCR6O00574 342 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 CSTF2P33240 577 aaKnown RBP eCLIP8.22□□□□□ -1.09
HSPG2-203ENST00000374695 WNT3AP56704 352 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 DUSP4Q13115 394 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 NFE2L1Q14494 772 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 SEC23AQ15436 765 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 RAP1GAP2Q684P5 730 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 SLC35G5Q96KT7 338 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 FXYD6Q9H0Q3 95 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 ABCG4Q9H172 646 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 B3GAT2Q9NPZ5 323 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 FLRT1Q9NZU1 646 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 ARL5AQ9Y689 179 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 TRIM64BA6NI03 449 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 M0R233 179 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 HK1P19367 917 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 TAS2R43P59537 309 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 NFKB2Q00653 900 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 SLC1A5Q15758 541 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 MSANTD2Q6P1R3 559 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 HDAC2Q92769 488 aaKnown RBP8.22□□□□□ -1.09
HSPG2-203ENST00000374695 BTN2A3PQ96KV6 586 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 SERINC1Q9NRX5 453 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 ZFP57Q9NU63 452 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 CPSF4LA6NMK7 179 aaKnown RBP8.22□□□□□ -1.09
HSPG2-203ENST00000374695 CCR8P51685 355 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 MPP1Q00013 466 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 MERTKQ12866 999 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 COL28A1Q2UY09 1125 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 ADGRD1Q6QNK2 874 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 ABHD13Q7L211 337 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 CPA6Q8N4T0 437 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 EPYCQ99645 322 aa8.22□□□□□ -1.09
HSPG2-203ENST00000374695 PBDC1Q9BVG4 233 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms