RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 SYNDIG1Q9H7V2 258 aa9.35□□□□□ -0.91
TMEM254-201ENST00000372273 NMRAL1Q9HBL8 299 aa9.35□□□□□ -0.91
TMEM254-201ENST00000372273 MRM3Q9HC36 420 aaKnown RBP9.35□□□□□ -0.91
TMEM254-201ENST00000372273 ZDHHC3Q9NYG2 299 aa9.35□□□□□ -0.91
TMEM254-201ENST00000372273 GALPQ9UBC7 116 aa9.35□□□□□ -0.91
TMEM254-201ENST00000372273 TSR3Q9UJK0 312 aaKnown RBP9.35□□□□□ -0.91
TMEM254-201ENST00000372273 SLC39A10Q9ULF5 831 aa9.35□□□□□ -0.91
TMEM254-201ENST00000372273 PADI4Q9UM07 663 aa9.35□□□□□ -0.91
TMEM254-201ENST00000372273 C15orf41Q9Y2V0 281 aa9.35□□□□□ -0.91
TMEM254-201ENST00000372273 RNF215Q9Y6U7 377 aa9.35□□□□□ -0.91
TMEM254-201ENST00000372273 IGLV3-16A0A075B6K0 115 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 VGLL3A8MV65 326 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 B2RBV5 119 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 KMOO15229 486 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 PEX11AO75192 247 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 ALPPL2P10696 532 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 PMLP29590 882 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 FMO4P31512 558 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 PRKAA2P54646 552 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 MPP1Q00013 466 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 GTF2H3Q13889 308 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 USP10Q14694 798 aaKnown RBP9.34□□□□□ -0.91
TMEM254-201ENST00000372273 ARMC3Q5W041 872 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 NEPROQ6NW34 567 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 EFL1Q7Z2Z2 1120 aaKnown RBP9.34□□□□□ -0.91
TMEM254-201ENST00000372273 AMZ2Q86W34 360 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 ARL14Q8N4G2 192 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 ARL10Q8N8L6 244 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 GPR156Q8NFN8 814 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 DTX3LQ8TDB6 740 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 SCG3Q8WXD2 468 aaKnown RBP9.34□□□□□ -0.91
TMEM254-201ENST00000372273 STMN2Q93045 179 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 DUSP23Q9BVJ7 150 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 DCLRE1BQ9H816 532 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 CAB39LQ9H9S4 337 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 ZNF358Q9NW07 568 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 TAS2R1Q9NYW7 299 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 LRIT1Q9P2V4 623 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 RUVBL2Q9Y230 463 aaKnown RBP9.34□□□□□ -0.91
TMEM254-201ENST00000372273 DSPP15924 2871 aaKnown RBP9.34□□□□□ -0.91
TMEM254-201ENST00000372273 IGF2RP11717 2491 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 LRP4O75096 1905 aa9.34□□□□□ -0.91
TMEM254-201ENST00000372273 UBA6A0AVT1 1052 aaPredicted RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 EME2A4GXA9 379 aaPredicted RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 KRT87PA6NCN2 255 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 A6NCN8 305 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CAPN14A8MX76 684 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 TRIM13O60858 407 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 DIAPH2O60879 1101 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CIB2O75838 187 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 TRIM16O95361 564 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 SAT1P21673 171 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 MPSTP25325 297 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 GABRB3P28472 473 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 PGM1P36871 562 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 SLC1A2P43004 574 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CPA2P48052 419 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CLCNKAP51800 687 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 KPNA2P52292 529 aaKnown RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 SLC12A2P55011 1212 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 OR1D5P58170 312 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 IRF9Q00978 393 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 LRP8Q14114 963 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 AMZ1Q400G9 498 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 IYDQ6PHW0 289 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 TMPRSS9Q7Z410 1059 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CLEC14AQ86T13 490 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 ZC3HC1Q86WB0 502 aaKnown RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CILP2Q8IUL8 1156 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 PLD6Q8N2A8 252 aaKnown RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 SDR16C5Q8N3Y7 309 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 FAM181AQ8N9Y4 354 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CCDC74AQ96AQ1 378 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 SCYL1Q96KG9 808 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 ANKRD27Q96NW4 1050 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 BIRC8Q96P09 236 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CDC6Q99741 560 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 EBF4Q9BQW3 602 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 FAM167BQ9BTA0 163 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CCDC106Q9BWC9 280 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 DENND2DQ9H6A0 471 aaPredicted RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 ZNF624Q9P2J8 865 aaPredicted RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CIDEBQ9UHD4 219 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 MCM8Q9UJA3 840 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 ATXN7L1Q9ULK2 861 aaPredicted RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 COL6A2P12110 1019 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 STMN1P16949 149 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 SDHBP21912 280 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CCR7P32248 378 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 NSG1P42857 185 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 PRLHRP49683 370 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 ASPHQ12797 758 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 BOP1Q14137 746 aaKnown RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 NR0B2Q15466 257 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 VRK3Q8IV63 474 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 CNTN4Q8IWV2 1026 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 SFRP1Q8N474 314 aa9.33□□□□□ -0.92
TMEM254-201ENST00000372273 ENDOVQ8N8Q3 282 aaKnown RBP9.33□□□□□ -0.92
TMEM254-201ENST00000372273 PHC3Q8NDX5 983 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms