RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 HID1Q8IV36 788 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 SLC44A2Q8IWA5 706 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 TRIM48Q8IWZ4 208 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 GLB1L3Q8NCI6 653 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ST13P5Q8NFI4 369 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 TRIB2Q92519 343 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 DNASE1L2Q92874 299 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 FUBP1Q96AE4 644 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 FAM167AQ96KS9 214 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 BTN2A3PQ96KV6 586 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 KCNC2Q96PR1 638 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 TRIM54Q9BYV2 358 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 RMND5AQ9H871 391 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 ACOT13Q9NPJ3 140 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 MRGBPQ9NV56 204 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 TMEM184CQ9NVA4 438 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 THG1LQ9NWX6 298 aaKnown RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 OSER1Q9NX31 292 aa5.31□□□□□ -1.56
ATG4A-204ENST00000372246 RCOR3Q9P2K3 495 aaPredicted RBP5.31□□□□□ -1.56
ATG4A-204ENST00000372246 PAPPA2Q9BXP8 1791 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PABPN1LA6NDY0 278 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ZSCAN5BA6NJL1 495 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 M0R082 166 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PDHXO00330 501 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 AREL1O15033 823 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 AKR7A2O43488 359 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 LDB2O43679 373 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PCDHGA12O60330 932 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 NBNO60934 754 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 RHOBTB1O94844 696 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 SLC2A3P11169 496 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 FCGR1AP12314 374 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 POU2F1P14859 743 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ITIH1P19827 911 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 IGFBP5P24593 272 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 HOXA9P31269 272 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CA5AP35218 305 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 BRCC3P46736 316 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 SERPINH1P50454 418 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PPP5CP53041 499 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 HOXC5Q00444 222 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CD83Q01151 205 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ARHGAP1Q07960 439 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 DBPQ10586 325 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 LCP2Q13094 533 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TUBA3CQ13748 450 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 COL9A2Q14055 689 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 VGLL4Q14135 290 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 INTS6LQ5JSJ4 861 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TPRG1LQ5T0D9 272 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ARTNQ5T4W7 220 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 KIAA0930Q6ICG6 404 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 KDELC1Q6UW63 502 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 FKBP9P1Q75LS8 142 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PLPPR4Q7Z2D5 763 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 NECAB2Q7Z6G3 386 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 SLC22A9Q8IVM8 553 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PIANPQ8IYJ0 282 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 OR8H2Q8N162 312 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CFAP52Q8N1V2 620 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TTC39CQ8N584 583 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 TERB1Q8NA31 727 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 LEMD2Q8NC56 503 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 IL17RDQ8NFM7 739 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 VANGL1Q8TAA9 524 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CALML6Q8TD86 181 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CHAC2Q8WUX2 184 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 DNAJB3Q8WWF6 145 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 EGLN2Q96KS0 407 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 FCRL5Q96RD9 977 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 SDHCQ99643 169 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CDADC1Q9BWV3 514 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 QTRT2Q9H974 415 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 AGO3Q9H9G7 860 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 RANGRFQ9HD47 186 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 MIOSQ9NXC5 875 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 SMPD4Q9NXE4 827 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 GPR83Q9NYM4 423 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 ERAP1Q9NZ08 941 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CD274Q9NZQ7 290 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 LEF1Q9UJU2 399 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CDV3Q9UKY7 258 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 MAFFQ9ULX9 164 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 AAR2Q9Y312 384 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 LTBP3Q9NS15 1303 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PNMA8CA0A1B0GUJ8 204 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 C16orf96A6NNT2 1141 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 A8MX80 341 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 HHLA1C9JL84 531 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 WWP2O00308 870 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CXCR6O00574 342 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 PTGESO14684 152 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 MATN3O15232 486 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CD3EAPO15446 510 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 DYRK3O43781 588 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 AIREO43918 545 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 WBP4O75554 376 aaKnown RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 CNMDO75829 334 aa5.3□□□□□ -1.56
ATG4A-204ENST00000372246 WISP3O95389 354 aaPredicted RBP5.3□□□□□ -1.56
ATG4A-204ENST00000372246 MATN4O95460 622 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms