RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 GRIA3P42263 894 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 GNPDA1P46926 289 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 TPMTP51580 245 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ARPP19P56211 112 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 PROX2Q3B8N5 592 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ESCO2Q56NI9 601 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 TPRG1LQ5T0D9 272 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 GALNT18Q6P9A2 607 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SPOCD1Q6ZMY3 1216 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 GCNT7Q6ZNI0 430 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 Q8N9G6 341 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 KCT2Q8NC54 265 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 COQ10AQ96MF6 247 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 COQ7Q99807 217 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 KIFC1Q9BW19 673 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 OR51B5Q9H339 312 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SAYSD1Q9NPB0 183 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SLC39A1Q9NY26 324 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 KLQ9UEF7 1012 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 DCTN4Q9UJW0 460 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 TMPRSS11EQ9UL52 423 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SCML1Q9UN30 329 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SNX10Q9Y5X0 201 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 LNP1A1A4G5 178 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 A6NL46 340 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ASNA1O43681 348 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 PRAMEF11O60813 436 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 MTHFD1P11586 935 aaKnown RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 MIPP30301 263 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 NR4A2P43354 598 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SERPINH1P50454 418 aaKnown RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 NRLP54845 237 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 OLR1P78380 273 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 SP140Q13342 867 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 DPYSL3Q14195 570 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 TFDP3Q5H9I0 405 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 BNC2Q6ZN30 1099 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 CPNE9Q8IYJ1 553 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 RTL3Q8N8U3 475 aaKnown RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 OR2T3Q8NH03 318 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ACTL9Q8TC94 416 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 JPH3Q8WXH2 748 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 NKD2Q969F2 451 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 FKBP10Q96AY3 582 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 ARRDC3Q96B67 414 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 IL12RB2Q99665 862 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 RTKNQ9BST9 563 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 NARFLQ9H6Q4 476 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 CNOT6Q9ULM6 557 aaKnown RBP6.73□□□□□ -1.33
CSDE1-204ENST00000369530 USP18Q9UMW8 372 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 MGAQ8IWI9 3026 aa6.73□□□□□ -1.33
CSDE1-204ENST00000369530 A0A1B0GVM2 712 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 TCAF2A6NFQ2 919 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CCRL2O00421 344 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 TERTO14746 1132 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 RHOQP17081 205 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PRKAR1BP31321 381 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 TRIM23P36406 574 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 MAGEA4P43358 317 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 FNTBP49356 437 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ADPRHP54922 357 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 EIF3EP60228 445 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 RPS24P62847 133 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 OTUD4Q01804 1114 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 RUNX1T1Q06455 604 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF33BQ06732 778 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PMS2P3Q13401 168 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 RFTN1Q14699 578 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ATG16L1Q676U5 607 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PRPF39Q86UA1 669 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 UNC45BQ8IWX7 931 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PYROXD2Q8N2H3 581 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SLC25A41Q8N5S1 370 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ANKFN1Q8N957 763 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CIDECQ96AQ7 238 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 TRIM62Q9BVG3 475 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 MUC3BQ9H195 1237 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 BRD9Q9H8M2 597 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PLAC1Q9HBJ0 212 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 TIGARQ9NQ88 270 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 USP24Q9UPU5 2620 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PCDHGA12O60330 932 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ATG13O75143 517 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 MT-CO1P00395 513 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 KRT15P19012 456 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 GRK2P25098 689 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 RGRP47804 291 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CXCL12P48061 93 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 MMRN1Q13201 1228 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SLC14A1Q13336 389 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SNTA1Q13424 505 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SMAD1Q15797 465 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 LRRC36Q1X8D7 754 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF704Q6ZNC4 412 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 FKBP9P1Q75LS8 142 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PRSS48Q7RTY5 328 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 TECPR1Q7Z6L1 1165 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 FAM124AQ86V42 546 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 FAM131BQ86XD5 332 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 DENND1CQ8IV53 801 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms