RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ITGA1P56199 1179 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 BASP1P80723 227 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TLE1Q04724 770 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 HSPA14Q0VDF9 509 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KCNJ11Q14654 390 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 LACTB2Q53H82 288 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ARMC3Q5W041 872 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TTC27Q6P3X3 843 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 UNC5DQ6UXZ4 953 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 SYTL1Q8IYJ3 562 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KRT222Q8N1A0 295 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MPP5Q8N3R9 675 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ENDOVQ8N8Q3 282 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CLIP3Q96DZ5 547 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MFSD3Q96ES6 412 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 BIRC8Q96P09 236 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 DPH2Q9BQC3 489 aaPredicted RBP13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ENAMQ9NRM1 1142 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 SYBUQ9NX95 663 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 BFARQ9NZS9 450 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ANAPC5Q9UJX4 755 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TCFL5Q9UL49 500 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PLAGL1Q9UM63 463 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 SOX13Q9UN79 622 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MAN2B2Q9Y2E5 1009 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TDRKHQ9Y2W6 561 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 NEU2Q9Y3R4 380 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 SNRNP200O75643 2136 aaKnown RBP13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 FER1L5A0AVI2 2057 aa13.19□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PCSK5Q92824 1860 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 E7EQ34 232 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MKRN2OSH3BPM6 223 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MAP3K7O43318 606 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PRICKLE3O43900 615 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PDGFAP04085 211 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 NR1D1P20393 614 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CYP2A7P20853 494 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MGAT1P26572 445 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CSE1LP55060 971 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 GBX1Q14549 363 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TYSND1Q2T9J0 566 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 RHBDD2Q6NTF9 364 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 GSTA5Q7RTV2 222 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CAND1Q86VP6 1230 aaKnown RBP13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 LRRC6Q86X45 466 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TSSK1BQ9BXA7 367 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TTC7AQ9ULT0 858 aaPredicted RBP13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 SEC16AO15027 2179 aa13.18□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KDM1AO60341 852 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 AVILO75366 819 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KLF7O75840 302 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CEACAM4O75871 244 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 DNAJB5O75953 348 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 APOA4P06727 396 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 HBQ1P09105 142 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CD9P21926 228 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ADARP55265 1226 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CYP1B1Q16678 543 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PTCHD3Q3KNS1 767 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CTSL3PQ5NE16 218 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 FAM69BQ5VUD6 431 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PAPD7Q5XG87 772 aaKnown RBP13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CPZQ66K79 652 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CES3Q6UWW8 571 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 DCUN1D3Q8IWE4 304 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 OR2L8Q8NGY9 312 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 LPGAT1Q92604 370 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 GBP5Q96PP8 586 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PANX3Q96QZ0 392 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 SPRTNQ9H040 489 aaPredicted RBP13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 GNPTGQ9UJJ9 305 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 JRKLQ9Y4A0 524 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 AP1M2Q9Y6Q5 423 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MED13Q9UHV7 2174 aa13.17□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ISM1B1AKI9 464 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 RASGRF2O14827 1237 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KPNA5O15131 536 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 OR2B3O76000 313 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 VAPBO95292 243 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 C1orf105O95561 183 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 RPN2P04844 631 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CBSLP0DN79 551 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 CBSP35520 551 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 FOXK1P85037 733 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KLRB1Q12918 225 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 NCF4Q15080 339 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TRIP13Q15645 432 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 DEFB110Q30KQ9 67 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ANKRD22Q5VYY1 191 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 PTRHD1Q6GMV3 140 aaKnown RBP13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 KIAA0930Q6ICG6 404 aaPredicted RBP13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 FAM20CQ8IXL6 584 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 GPR135Q8IZ08 494 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ZBTB2Q8N680 514 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 LMNTD1Q8N9Z9 388 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 MS4A14Q96JA4 679 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 TCF12Q99081 682 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 DHRS4Q9BTZ2 278 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 ING2Q9H160 280 aa13.16□□□□□ -0.3
TNFRSF1A-202ENST00000366159 SNX7Q9UNH6 387 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms