RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CMTR2Q8IYT2 770 aaKnown RBP13.69□□□□□ -0.22
SMC5-201ENST00000361138 OR13C4Q8NGS5 318 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 PIWIL1Q96J94 861 aaKnown RBP13.69□□□□□ -0.22
SMC5-201ENST00000361138 SLC27A5Q9Y2P5 690 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 PCDHGB3Q9Y5G1 929 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 SMIM35A0A1B0GVV1 85 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 ENGP17813 658 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 ATF6P18850 670 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 GTF2E2P29084 291 aaKnown RBP13.69□□□□□ -0.22
SMC5-201ENST00000361138 RFC2P35250 354 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 DCDC1P59894 354 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 ZNF252P-AS1Q0IIN9 211 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 BTBD16Q32M84 506 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 TAS1R3Q7RTX0 852 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 MINDY1Q8N5J2 469 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 TSPEARQ8WU66 669 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 HAPLN3Q96S86 360 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 POLR3BQ9NW08 1133 aaPredicted RBP13.69□□□□□ -0.22
SMC5-201ENST00000361138 FAM118AQ9NWS6 357 aa13.69□□□□□ -0.22
SMC5-201ENST00000361138 ZNF282Q9UDV7 671 aaPredicted RBP13.69□□□□□ -0.22
SMC5-201ENST00000361138 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
SMC5-201ENST00000361138 KRBA1A5PL33 1030 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 DYRK3O43781 588 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 YBEYP58557 167 aaPredicted RBP13.68□□□□□ -0.22
SMC5-201ENST00000361138 C2orf80Q0P641 193 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 TPGS1Q6ZTW0 290 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 SERPINA9Q86WD7 417 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 GRIN3AQ8TCU5 1115 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 POF1BQ8WVV4 589 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 GAB3Q8WWW8 586 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 RFKQ969G6 155 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 SLC7A5P2Q9GIP4 190 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 NCKAP1Q9Y2A7 1128 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 AP3S2P59780 193 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 PITPNAQ00169 270 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 GANABQ14697 944 aaKnown RBP13.68□□□□□ -0.22
SMC5-201ENST00000361138 ACAT2Q9BWD1 397 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 TVP23BQ9NYZ1 205 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 NUDT6P53370 316 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 KCNAB2Q13303 367 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 DPY19L1Q2PZI1 675 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 XKRXQ6PP77 449 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 CLEC20AQ6ZU45 233 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 LGI4Q8N135 537 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 ARMC1Q9NVT9 282 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 PCDHB3Q9Y5E6 796 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 TLR4O00206 839 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 TLR5O60602 858 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 URODP06132 367 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 SPAM1P38567 509 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 LILRA4P59901 499 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 GALNT2Q10471 571 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 CIR1Q86X95 450 aaPredicted RBP13.68□□□□□ -0.22
SMC5-201ENST00000361138 CILP2Q8IUL8 1156 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 MYRFLQ96LU7 910 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 DERL2Q9GZP9 239 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 VPS51Q9UID3 782 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 IRAK3Q9Y616 596 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 SPIN1Q9Y657 262 aaPredicted RBP13.68□□□□□ -0.22
SMC5-201ENST00000361138 NME6O75414 186 aaPredicted RBP13.68□□□□□ -0.22
SMC5-201ENST00000361138 CLDN11O75508 207 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 RLN1P04808 185 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 CHRM5P08912 532 aaPredicted RBP13.68□□□□□ -0.22
SMC5-201ENST00000361138 TACR2P21452 398 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 SCARB2Q14108 478 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 LCN8Q6JVE9 175 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 METTL3Q86U44 580 aaKnown RBP13.68□□□□□ -0.22
SMC5-201ENST00000361138 IGFN1Q86VF2 1251 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 SLC15A3Q8IY34 581 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 SORT1Q99523 831 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 LAMB4A4D0S4 1761 aa13.68□□□□□ -0.22
SMC5-201ENST00000361138 FFAR2O15552 330 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 EEDO75530 441 aaKnown RBP13.67□□□□□ -0.22
SMC5-201ENST00000361138 EFNA1P20827 205 aaPredicted RBP13.67□□□□□ -0.22
SMC5-201ENST00000361138 MAZP56270 477 aaKnown RBP13.67□□□□□ -0.22
SMC5-201ENST00000361138 SEMA3AQ14563 771 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 TECRLQ5HYJ1 363 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 TMPRSS11BQ86T26 416 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 ITM2CQ9NQX7 267 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 THUMPD1Q9NXG2 353 aaKnown RBP13.67□□□□□ -0.22
SMC5-201ENST00000361138 I3L521 148 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 VILLO15195 856 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 ZDHHC20Q5W0Z9 365 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 GOLGA7Q7Z5G4 137 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 SLC37A3Q8NCC5 494 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 MOSPD2Q8NHP6 518 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 KCTD13Q8WZ19 329 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 ZNF597Q96LX8 424 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 DUSP26Q9BV47 211 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 PRORSD1PA6NEY8 169 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 G3V2L1 256 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 FGBP02675 491 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 WEE1P30291 646 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 NKX2-5P52952 324 aaPredicted RBP13.67□□□□□ -0.22
SMC5-201ENST00000361138 GK3PQ14409 553 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 C15orf39Q6ZRI6 1047 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 ZNF438Q7Z4V0 828 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 OR6K2Q8NGY2 324 aa13.67□□□□□ -0.22
SMC5-201ENST00000361138 ZNF675Q8TD23 568 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms