RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 ANGPTL3Q9Y5C1 460 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 DOCK3Q8IZD9 2030 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 STX16O14662 325 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 MGEA5O60502 916 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 B4GALT3O60512 393 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 NDST3O95803 873 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 S100BP04271 92 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CTPS1P17812 591 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 KRT20P35900 424 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 DGKEP52429 567 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CRISP3P54108 245 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 FCGRTP55899 365 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 ZXDBP98169 803 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CDC42EP1Q00587 391 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CREMQ03060 361 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 GRIK2Q13002 908 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 LRIT3Q3SXY7 679 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 UBE2UQ5VVX9 321 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CPZQ66K79 652 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CD300LGQ6UXG3 332 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CCDC71Q8IV32 467 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 CHPFQ8IZ52 775 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 NKAPQ8N5F7 415 aaKnown RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 GPR150Q8NGU9 434 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 BOCQ9BWV1 1114 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 TRIT1Q9H3H1 467 aaKnown RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 PRM3Q9NNZ6 103 aa9.92□□□□□ -0.82
PTPRA-203ENST00000356147 DCAF13Q9NV06 445 aaKnown RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 AFF4Q9UHB7 1163 aaKnown RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 EIF3LQ9Y262 564 aaKnown RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 PRG3Q9Y2Y8 225 aaPredicted RBP9.92□□□□□ -0.82
PTPRA-203ENST00000356147 H0Y626 953 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TRIM16O95361 564 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 ALOX5P09917 674 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 HSMCR30P0CW71 290 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TACR1P25103 407 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 CD52P31358 61 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 GRK5P34947 590 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 BMPR1AP36894 532 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 PBX3P40426 434 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 EIF2DP41214 584 aaKnown RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF140P52738 457 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 RPS24P62847 133 aaKnown RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 SPATS1Q496A3 300 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 GATAD2AQ86YP4 633 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 RGL4Q8IZJ4 473 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 GPC2Q8N158 579 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 SVOPLQ8N434 492 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TEX26Q8N6G2 289 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TTC29Q8NA56 475 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 OR6K2Q8NGY2 324 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 RHOXF1Q8NHV9 184 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 PKMYT1Q99640 499 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 C14orf119Q9NWQ9 140 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 SIRT5Q9NXA8 310 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 SCN3BQ9NY72 215 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 GPRC5BQ9NZH0 403 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 FLRT1Q9NZU1 646 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF490Q9ULM2 529 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 NOD1Q9Y239 953 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 DLGAP4Q9Y2H0 992 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 OTOFQ9HC10 1997 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 ARNTLO00327 626 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 RGS10O43665 173 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 FKBP9O95302 570 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 ABCB1P08183 1280 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 CCDC159P0C7I6 412 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 MSH3P20585 1137 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 GADD45AP24522 165 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 IL10RBQ08334 325 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TRAF3Q13114 568 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 DOK6Q6PKX4 331 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 FKBP9P1Q75LS8 142 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 EFL1Q7Z2Z2 1120 aaKnown RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 OR8J3Q8NGG0 315 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 LKAAEAR1Q8TD35 194 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 ATL1Q8WXF7 558 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 BHMTQ93088 406 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 SLC39A13Q96H72 371 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 KAT8Q9H7Z6 458 aaKnown RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 FBXO8Q9NRD0 319 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 NLE1Q9NVX2 485 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TAS2R16Q9NYV7 291 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 KIF17Q9P2E2 1029 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TLR6Q9Y2C9 796 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TPRKBQ9Y3C4 175 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 MYADML2A6NDP7 307 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 LOC730098B7Z3J9 87 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 AP3D1O14617 1153 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 FFAR2O15552 330 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 PCDHGA12O60330 932 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 CYP7B1O75881 506 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 GLUD1P00367 558 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TRPC1P48995 793 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 PPP5CP53041 499 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 VLDLRP98155 873 aa9.91□□□□□ -0.82
PTPRA-203ENST00000356147 TOP3AQ13472 1001 aaPredicted RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 SF1Q15637 639 aaKnown RBP9.91□□□□□ -0.82
PTPRA-203ENST00000356147 ZCCHC8Q6NZY4 707 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms