RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 DNMT3BQ9UBC3 853 aaKnown RBP13.32□□□□□ -0.28
TRIM4-203ENST00000355947 RRN3P2A6NIE6 340 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 LOC110117498-PIK3R3F6TDL0 507 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 GRK3P35626 688 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 LIPAP38571 399 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 SMARCB1Q12824 385 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 TIGD6Q17RP2 521 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 SCD5Q86SK9 330 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 TRIM48Q8IWZ4 208 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 B3GNT3Q9Y2A9 372 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 ILVBLA1L0T0 632 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 HHLA1C9JL84 531 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 GABRDO14764 452 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 KCNK2O95069 426 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 MED26O95402 600 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 C7P10643 843 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 JUNBP17275 347 aaPredicted RBP13.32□□□□□ -0.28
TRIM4-203ENST00000355947 KRT20P35900 424 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 RPS24P62847 133 aaKnown RBP13.32□□□□□ -0.28
TRIM4-203ENST00000355947 PPP2R2BQ00005 443 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 TIAL1Q01085 375 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRIM4-203ENST00000355947 TOP3AQ13472 1001 aaPredicted RBP13.32□□□□□ -0.28
TRIM4-203ENST00000355947 PRSS36Q5K4E3 855 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 OR4F3Q6IEY1 312 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 BHLHA9Q7RTU4 235 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 EFL1Q7Z2Z2 1120 aaKnown RBP13.32□□□□□ -0.28
TRIM4-203ENST00000355947 SLC44A2Q8IWA5 706 aaPredicted RBP13.32□□□□□ -0.28
TRIM4-203ENST00000355947 FBXO32Q969P5 355 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 MYEOVQ96EZ4 313 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 IMPAD1Q9NX62 359 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 ZIM2Q9NZV7 527 aa13.32□□□□□ -0.28
TRIM4-203ENST00000355947 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
TRIM4-203ENST00000355947 EVPLLA8MZ36 301 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 RFXANKO14593 260 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 MMP2P08253 660 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 SLC10A3P09131 477 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ATXN1LP0C7T5 689 aaKnown RBP13.31□□□□□ -0.28
TRIM4-203ENST00000355947 RPL34P49207 117 aaKnown RBP13.31□□□□□ -0.28
TRIM4-203ENST00000355947 PPP5CP53041 499 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 CCL23P55773 120 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 OR2B6P58173 313 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 LRIT3Q3SXY7 679 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 MS4A13Q5J8X5 152 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 SNAP47Q5SQN1 464 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ZNF691Q5VV52 312 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 TLK2Q86UE8 772 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 LYSMD2Q8IV50 215 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 KLHDC9Q8NEP7 349 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 BRSK1Q8TDC3 778 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 MUC13Q9H3R2 512 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 MARCH2Q9P0N8 246 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 MOSPD1Q9UJG1 213 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ZNF221Q9UK13 617 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 BTBD3Q9Y2F9 522 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 GPSM3Q9Y4H4 160 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 PTCH2Q9Y6C5 1203 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 DNAJC25-GNG10A0A024R161 153 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 CTDSP2O14595 271 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 KCNE1P15382 129 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ITIH1P19827 911 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 HMGB2P26583 209 aaKnown RBP13.31□□□□□ -0.28
TRIM4-203ENST00000355947 KCNQ1P51787 676 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 DEFA1P59665 94 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 DEFA3P59666 94 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 RUNDC3AQ59EK9 446 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 NKAPQ8N5F7 415 aaKnown RBP13.31□□□□□ -0.28
TRIM4-203ENST00000355947 SELENOMQ8WWX9 145 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 SERPINB11Q96P15 392 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 CIPCQ9C0C6 399 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ACTL8Q9H568 366 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 RMND5AQ9H871 391 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 REEP1Q9H902 201 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 LRTM1Q9HBL6 345 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 C8orf4Q9NR00 106 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 PLSCR3Q9NRY6 295 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 GPR83Q9NYM4 423 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 SLC25A37Q9NYZ2 338 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 OPTCQ9UBM4 332 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 PCDHB9Q9Y5E1 797 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 LCHNA4D1U4 455 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 PABPN1LA6NDY0 278 aaKnown RBP13.31□□□□□ -0.28
TRIM4-203ENST00000355947 TTC34A8MYJ7 566 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 GABARAPO95166 117 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 RPS17P08708 135 aaKnown RBP13.31□□□□□ -0.28
TRIM4-203ENST00000355947 STSP08842 583 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 OR1E2P47887 323 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 OR1G1P47890 313 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ZFP69Q49AA0 526 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 MSANTD2Q6P1R3 559 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 SVOPQ8N4V2 548 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 AMER2Q8N7J2 671 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ZNF548Q8NEK5 533 aaPredicted RBP13.31□□□□□ -0.28
TRIM4-203ENST00000355947 RHOXF1Q8NHV9 184 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ARRDC2Q8TBH0 407 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 PANX1Q96RD7 426 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 TTPALQ9BTX7 342 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 TIGARQ9NQ88 270 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 C1orf109Q9NX04 203 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 ITGB1BP2Q9UKP3 347 aa13.31□□□□□ -0.28
TRIM4-203ENST00000355947 POLR2AP24928 1970 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms