RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 CLDN2P57739 230 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 SGO1Q5FBB7 561 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ZC3H12BQ5HYM0 836 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 RWDD4Q6NW29 188 aaKnown RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 VASH1Q7L8A9 365 aaPredicted RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 CCDC91Q7Z6B0 441 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 VPS52Q8N1B4 723 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 CRYBG2Q8N1P7 616 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ANKRD52Q8NB46 1076 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 NETO1Q8TDF5 533 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 RSPRY1Q96DX4 576 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 VPS50Q96JG6 964 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 MYADMQ96S97 322 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 TMEM79Q9BSE2 394 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 DGCR6LQ9BY27 220 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 NT5MQ9NPB1 228 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ABI2Q9NYB9 513 aaPredicted RBP5.49□□□□□ -1.53
CD47-201ENST00000355354 SARDHQ9UL12 918 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 PCDHGA11Q9Y5H2 935 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 LINC00854A0A1B0GVQ3 168 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 MAPK13O15264 365 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 AHCYL1O43865 530 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 GCATO75600 419 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ABHD2P08910 425 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ACADSP16219 412 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 GSK3BP49841 420 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ARPP19P56211 112 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ZNF385BQ569K4 471 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ARHGEF18Q6ZSZ5 1173 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 PCGF5Q86SE9 256 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 MAIP1Q8WWC4 291 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 DNASE1L2Q92874 299 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 MYLPFQ96A32 169 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 QKIQ96PU8 341 aaKnown RBP eCLIP5.49□□□□□ -1.532e-6■■■■■ 80.9
CD47-201ENST00000355354 MBOAT4Q96T53 435 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 TRIM55Q9BYV6 548 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 RBM22Q9NW64 420 aaKnown RBP eCLIP5.49□□□□□ -1.53
CD47-201ENST00000355354 GMIPQ9P107 970 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 PDE10AQ9Y233 779 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 ANKRD6Q9Y2G4 727 aa5.49□□□□□ -1.53
CD47-201ENST00000355354 CASQ2O14958 399 aaPredicted RBP5.48□□□□□ -1.53
CD47-201ENST00000355354 GDF9O60383 454 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 GPC4O75487 556 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 GSTT2P0CG29 244 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 GSTT2BP0CG30 244 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 PIM1P11309 404 aaPredicted RBP5.48□□□□□ -1.53
CD47-201ENST00000355354 TCEA1P23193 301 aaKnown RBP5.48□□□□□ -1.53
CD47-201ENST00000355354 SEPHS1P49903 392 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 EFNA3P52797 238 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 PLA2G7Q13093 441 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 MELKQ14680 651 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 RAB39AQ14964 217 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 SLC25A52Q3SY17 297 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 CACHD1Q5VU97 1274 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 ATG16L1Q676U5 607 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 MYPOPQ86VE0 399 aaPredicted RBP5.48□□□□□ -1.53
CD47-201ENST00000355354 KCNMB4Q86W47 210 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 RFLNBQ8N5W9 214 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 DNAAF3Q8N9W5 541 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 TDRD5Q8NAT2 981 aaKnown RBP5.48□□□□□ -1.53
CD47-201ENST00000355354 DRAXINQ8NBI3 349 aaPredicted RBP5.48□□□□□ -1.53
CD47-201ENST00000355354 PROX1Q92786 737 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 C7orf26Q96N11 449 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 NPAS1Q99742 590 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 NIPSNAP1Q9BPW8 284 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 SLC6A17Q9H1V8 727 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 WNT16Q9UBV4 365 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 GPR45Q9Y5Y3 372 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 PSMD12O00232 456 aaPredicted RBP5.48□□□□□ -1.53
CD47-201ENST00000355354 BNIP3LO60238 219 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 SUPT7LO94864 414 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 C9P02748 559 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 PCMT1P22061 227 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 HPCAP84074 193 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 IL9RQ01113 521 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 MPP3Q13368 585 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 PM20D1Q6GTS8 502 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 USP43Q70EL4 1123 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 SHFQ7M4L6 423 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 TMEFF1Q8IYR6 380 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 WNT2BQ93097 391 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 TMEM125Q96AQ2 219 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 PRRG3Q9BZD7 231 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 IP6K2Q9UHH9 426 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 BCAP29Q9UHQ4 241 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 ZMYM5Q9UJ78 669 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 SORCS3Q9UPU3 1222 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 SSUH2Q9Y2M2 353 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 ATG4BQ9Y4P1 393 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 MCF2LO15068 1137 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 CCDC22O60826 627 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 EML2O95834 649 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 SERPINA6P08185 405 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 UQCRBP14927 111 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 EPCAMP16422 314 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 CCR1P32246 355 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 PLA2G16P53816 162 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 RPS15P62841 145 aaKnown RBP5.48□□□□□ -1.53
CD47-201ENST00000355354 MXRA7P84157 204 aa5.48□□□□□ -1.53
CD47-201ENST00000355354 MAP7Q14244 749 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms