RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 NTPCRQ9BSD7 190 aaKnown RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 TFB2MQ9H5Q4 396 aaKnown RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 IL1RAPQ9NPH3 570 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 ZNF358Q9NW07 568 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 SLIT3O75094 1523 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 A0A1W2PQ72 361 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 J3KR12 359 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 MLLT3P42568 568 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 Q6ZVU0 165 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 USP30Q70CQ3 517 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 LAPTM4BQ86VI4 370 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 CHERPQ8IWX8 916 aaKnown RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 SLC22A15Q8IZD6 547 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 DGCR14Q96DF8 476 aaKnown RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 SUSD3Q96L08 255 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 PRICKLE1Q96MT3 831 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 GSDMCQ9BYG8 508 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 TTYH3Q9C0H2 523 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 MINDY3Q9H8M7 445 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 ZDHHC3Q9NYG2 299 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 CHRNA6Q15825 494 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 TMEM145Q8NBT3 493 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 OR2AJ1Q8NGZ0 328 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 HPS1Q92902 700 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 ACDQ96AP0 544 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 GPR88Q9GZN0 384 aa12.96□□□□□ -0.33
SCN8A-202ENST00000355133 SSU72Q9NP77 194 aaKnown RBP12.96□□□□□ -0.33
SCN8A-202ENST00000355133 A0A0J9YVX5 310 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 MPZL2O60487 215 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 CFHP08603 1231 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 CBFBQ13951 182 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 TDRPQ86YL5 185 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 SIPA1Q96FS4 1042 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 MIPEPQ99797 713 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 COMMD4Q9H0A8 199 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 GRHL1Q9NZI5 618 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 CNTN3Q9P232 1028 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 TCRBV7S3A2A0A539 114 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 TLX3O43711 291 aaPredicted RBP12.96□□□□□ -0.34
SCN8A-202ENST00000355133 CREB1P16220 341 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 HMGCS1Q01581 520 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 PUS10Q3MIT2 529 aaKnown RBP12.96□□□□□ -0.34
SCN8A-202ENST00000355133 BICRALQ6AI39 1079 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 HFE2Q6ZVN8 426 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 SVOPLQ8N434 492 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 GRHL3Q8TE85 626 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 TBX5Q99593 518 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 GMEB2Q9UKD1 530 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 INSL6Q9Y581 213 aa12.96□□□□□ -0.34
SCN8A-202ENST00000355133 AZGP1P25311 298 aaKnown RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 PDX1P52945 283 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 TAS2R50P59544 299 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 SCARB2Q14108 478 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 EIPR1Q53HC9 387 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 TOR1AIP1Q5JTV8 583 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 TCEAL6Q6IPX3 200 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 PLET1Q6UQ28 207 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 ARMCX6Q7L4S7 300 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 SPATA9Q9BWV2 254 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 PLIN4Q96Q06 1357 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 HAS3O00219 553 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 ADAMTS3O15072 1205 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 AXIN1O15169 862 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 HCRTO43612 131 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 PEX2P28328 305 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 MPIP34949 423 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 CRISP3P54108 245 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 GMFBP60983 142 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 HYAL2Q12891 473 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 LCN1P1Q5VSP4 162 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 DRICH1Q6PGQ1 229 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 RASGRP3Q8IV61 690 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 OR5AK3PQ8NH89 298 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 TRIM2Q9C040 744 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 DENND2DQ9H6A0 471 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 MCCC2Q9HCC0 563 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 PPM1HQ9ULR3 514 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 FAM172BPA6NC97 362 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 A8MU76 341 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 E7ENX8 843 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 TULP2O00295 520 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 HMGB3O15347 200 aaKnown RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 SCGNO76038 276 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 BDKRB1P46663 353 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 HERVK_113P63132 956 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 VLDLRP98155 873 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 CNKSR3Q6P9H4 555 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 MBOAT1Q6ZNC8 495 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 ABHD13Q7L211 337 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 SATL1Q86VE3 508 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 SAMD14Q8IZD0 417 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 LNX2Q8N448 690 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 OR6K6Q8NGW6 343 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 NTAN1Q96AB6 310 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF514Q96K75 400 aaPredicted RBP12.95□□□□□ -0.34
SCN8A-202ENST00000355133 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
SCN8A-202ENST00000355133 TWNKQ96RR1 684 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms