RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 PAFAH2Q99487 392 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 MCMBPQ9BTE3 642 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 TXLNGYQ9BZA5 131 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 RAB33BQ9H082 229 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 RDH14Q9HBH5 336 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 EPHA6Q9UF33 1036 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 ZNF180Q9UJW8 692 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 RAB21Q9UL25 225 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 ENTPD2Q9Y5L3 495 aa11.5□□□□□ -0.57
SNCA-202ENST00000345009 NCOR2Q9Y618 2525 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 CEP295Q9C0D2 2601 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 PRAMEF33A0A0G2JMD5 474 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 OR6C74A6NCV1 312 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 GFYI3L273 518 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 TOX3O15405 576 aaPredicted RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 CAPN5O15484 640 aaPredicted RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 CSO75390 466 aaKnown RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 PSIP1O75475 530 aaKnown RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 ADRB1P08588 477 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 ZNF37AP17032 561 aaPredicted RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 TYK2P29597 1187 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 SLC26A3P40879 764 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 SERPINB8P50452 374 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 INHBCP55103 352 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 EIF3IQ13347 325 aaKnown RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 ARHGAP19Q14CB8 494 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 EFTUD2Q15029 972 aaKnown RBP eCLIP11.49□□□□□ -0.57
SNCA-202ENST00000345009 ISXQ2M1V0 245 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 PHF19Q5T6S3 580 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 IRGCQ6NXR0 463 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 UBE2R2Q712K3 238 aaPredicted RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 TBC1D1Q86TI0 1168 aaPredicted RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 CARFQ8N187 725 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 FBXO15Q8NCQ5 510 aaPredicted RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 OR9A1PQ8NGU1 263 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 GIMAP7Q8NHV1 300 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 CAVIN3Q969G5 261 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 MTBPQ96DY7 904 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 CD180Q99467 661 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 SLC30A3Q99726 388 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 OLFM1Q99784 485 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 CMKLR1Q99788 373 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 PARVBQ9HBI1 364 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 ATXN7L1Q9ULK2 861 aaPredicted RBP11.49□□□□□ -0.57
SNCA-202ENST00000345009 ACOT9Q9Y305 439 aa11.49□□□□□ -0.57
SNCA-202ENST00000345009 A0A087X1B8 175 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 IQANK1A0A1B0GTG1 560 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 GSAPA4D1B5 854 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 OR5K3A6NET4 321 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 C2orf74A8MZ97 194 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 RASGRF2O14827 1237 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 HGSO14964 777 aaPredicted RBP11.48□□□□□ -0.57
SNCA-202ENST00000345009 HYAL3O43820 417 aaPredicted RBP11.48□□□□□ -0.57
SNCA-202ENST00000345009 RASSF9O75901 435 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 FAM155BO75949 473 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 SYF2O95926 243 aaKnown RBP11.48□□□□□ -0.57
SNCA-202ENST00000345009 SNRPAP09012 282 aaKnown RBP11.48□□□□□ -0.57
SNCA-202ENST00000345009 ENO2P09104 434 aaPredicted RBP11.48□□□□□ -0.57
SNCA-202ENST00000345009 CCKBRP32239 447 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 CSTF2P33240 577 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNCA-202ENST00000345009 ARL4DP49703 201 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 AP1S2P56377 157 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 ATP6V0D1P61421 351 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 TIAL1Q01085 375 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNCA-202ENST00000345009 FOXK2Q01167 660 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 ZFP36L1Q07352 338 aaKnown RBP11.48□□□□□ -0.57
SNCA-202ENST00000345009 IFFO1Q0D2I5 559 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 TARDBPQ13148 414 aaKnown RBP eCLIP11.48□□□□□ -0.57
SNCA-202ENST00000345009 KIR2DS3Q14952 304 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 ANKS6Q68DC2 871 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 CYHR1Q6ZMK1 362 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 PIWIL4Q7Z3Z4 852 aaKnown RBP11.48□□□□□ -0.57
SNCA-202ENST00000345009 AENQ8WTP8 325 aaKnown RBP11.48□□□□□ -0.57
SNCA-202ENST00000345009 ATL1Q8WXF7 558 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 CCDC138Q96M89 665 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 TSNARE1Q96NA8 513 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 TGM7Q96PF1 710 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 NUDT22Q9BRQ3 303 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 SLC12A9Q9BXP2 914 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 NMRAL1Q9HBL8 299 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 SPATA7Q9P0W8 599 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 PDP2Q9P2J9 529 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 CTNNAL1Q9UBT7 734 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 NEUROG3Q9Y4Z2 214 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 NFS1Q9Y697 457 aa11.48□□□□□ -0.57
SNCA-202ENST00000345009 IGHV5-10-1A0A0J9YXX1 117 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 CCDC189A1A4V9 331 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 PIPSLA2A3N6 862 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 MYO1CO00159 1063 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 MPOP05164 745 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 CCDC166P0CW27 439 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 POLR2CP19387 275 aaPredicted RBP11.47□□□□□ -0.57
SNCA-202ENST00000345009 HSD17B3P37058 310 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 MMP16P51512 607 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 ZKSCAN8Q15776 578 aaPredicted RBP11.47□□□□□ -0.57
SNCA-202ENST00000345009 FAM83EQ2M2I3 478 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 SNAP47Q5SQN1 464 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 CACHD1Q5VU97 1274 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 KLC3Q6P597 504 aa11.47□□□□□ -0.57
SNCA-202ENST00000345009 CYB5D1Q6P9G0 228 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms