RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 CDH24Q86UP0 819 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF527Q8NB42 609 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 GTPBP3Q969Y2 492 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 TFB2MQ9H5Q4 396 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 SCML2Q9UQR0 700 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 PITPNM1O00562 1244 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 C9P02748 559 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 SOD2P04179 222 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 FAM163BP0C2L3 166 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 MC1RQ01726 317 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 ITPRIPL2Q3MIP1 535 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 Q8N9G6 341 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 GIPC3Q8TF64 312 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 RGMAQ96B86 450 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 GPATCH1Q9BRR8 931 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 C12orf65Q9H3J6 166 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 CRTAC1Q9NQ79 661 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 OR51F1A6NGY5 319 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 H0YGN5 161 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 PLK4O00444 970 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 POP7O75817 140 aaKnown RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 CCNHP51946 323 aaPredicted RBP14.72□□□□□ -0.05
UBE3B-202ENST00000342494 CCINQ13939 588 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 FAM131AQ6UXB0 335 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 GALNTL5Q7Z4T8 443 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 WDR60Q8WVS4 1066 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 C8orf48Q96LL4 319 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 OR51V1Q9H2C8 321 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 MINDY3Q9H8M7 445 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 PIGVQ9NUD9 493 aa14.72□□□□□ -0.05
UBE3B-202ENST00000342494 NPHS1O60500 1241 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 NIPSNAP2O75323 286 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 ADARP55265 1226 aaKnown RBP14.71□□□□□ -0.05
UBE3B-202ENST00000342494 MAPK14Q16539 360 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 DPY19L1Q2PZI1 675 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 PGAM4Q8N0Y7 254 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 CIB1Q99828 191 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 DZANK1Q9NVP4 752 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 hCG_2039718K7EN88 272 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 RGS10O43665 173 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 TGFB1P01137 390 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 PIGRP01833 764 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 NRLP54845 237 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 RASGEF1BQ0VAM2 473 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 SLC9B2Q86UD5 537 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF781Q8N8C0 355 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 DCAKDQ8WVC6 231 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 SLC13A3Q8WWT9 602 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 NCSTNQ92542 709 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 RENP00797 406 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 SERPINA3P01011 423 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 ZNF30P17039 623 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 CXCR1P25024 350 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 ITGA3P26006 1051 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 NFKB2Q00653 900 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 MFSD5Q6N075 450 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 CROCCP3Q8IVE0 287 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 KIAA1143Q96AT1 154 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-202ENST00000342494 RAD9AQ99638 391 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 TAC3Q9UHF0 121 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 NOX1Q9Y5S8 564 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 TTC24A2A3L6 582 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-202ENST00000342494 HAS3O00219 553 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 DNM1LO00429 736 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 MPZL2O60487 215 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 PRAMEF12O95522 483 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 JMJD7P0C870 316 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 ATP1B2P14415 290 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-202ENST00000342494 POU2F1P14859 743 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 RPL10P27635 214 aaKnown RBP14.71□□□□□ -0.05
UBE3B-202ENST00000342494 ACVRL1P37023 503 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 HCAR3P49019 387 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 S100ZQ8WXG8 99 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 PIWIL1Q96J94 861 aaKnown RBP14.71□□□□□ -0.05
UBE3B-202ENST00000342494 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.71□□□□□ -0.05
UBE3B-202ENST00000342494 RPL26L1Q9UNX3 145 aaKnown RBP14.71□□□□□ -0.05
UBE3B-202ENST00000342494 PCDHB3Q9Y5E6 796 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 DGKBQ9Y6T7 804 aa14.71□□□□□ -0.05
UBE3B-202ENST00000342494 PAPSS2O95340 614 aaPredicted RBP14.71□□□□□ -0.06
UBE3B-202ENST00000342494 MT-ND1P03886 318 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 PSMA1P25786 263 aaKnown RBP14.71□□□□□ -0.06
UBE3B-202ENST00000342494 IL12AP29459 219 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 SCNN1AP37088 669 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 STARP49675 285 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 GDF10P55107 478 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 ATG14Q6ZNE5 492 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 MEIOBQ8N635 442 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 SMPDL3AQ92484 453 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 C11orf24Q96F05 449 aaPredicted RBP14.71□□□□□ -0.06
UBE3B-202ENST00000342494 NKIRAS2Q9NYR9 191 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 WRAP73Q9P2S5 460 aaPredicted RBP14.71□□□□□ -0.06
UBE3B-202ENST00000342494 COQ4Q9Y3A0 265 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 HS3ST4Q9Y661 456 aa14.71□□□□□ -0.06
UBE3B-202ENST00000342494 CDC7O00311 574 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 PPEF2O14830 753 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 GADD45GO95257 159 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 F2P00734 622 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 CD2P06729 351 aa14.7□□□□□ -0.06
UBE3B-202ENST00000342494 HAPLN1P10915 354 aaPredicted RBP14.7□□□□□ -0.06
UBE3B-202ENST00000342494 SCRN3Q0VDG4 424 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms