RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ANKRD20A4Q4UJ75 823 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 DMRTA1Q5VZB9 504 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 NEPROQ6NW34 567 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 SYDE1Q6ZW31 735 aaPredicted RBP12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 ZNF843Q8N446 348 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 C19orf47Q8N9M1 422 aaKnown RBP12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 CALML6Q8TD86 181 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 EXTL1Q92935 676 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 BIRC8Q96P09 236 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 TRAPPC9Q96Q05 1148 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 DPH2Q9BQC3 489 aaPredicted RBP12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 NAT9Q9BTE0 207 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 XKR8Q9H6D3 395 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 TUBD1Q9UJT1 453 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 SERTAD3Q9UJW9 196 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 CFAP46Q8IYW2 2715 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 BOD1L1Q8NFC6 3051 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 A0A0J9YY10 115 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 SMAPO00193 183 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 TERTO14746 1132 aaKnown RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF185O15231 689 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 TIAF1O95411 115 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 PRB1P04280 392 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 KLK3P07288 261 aaPredicted RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 ST6GAL1P15907 406 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 UGT2B7P16662 529 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 PKLRP30613 574 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 CCR10P46092 362 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 CSE1LP55060 971 aaKnown RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 GNG11P61952 73 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 CYP4F2P78329 520 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 THOC5Q13769 683 aaKnown RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 PTK6Q13882 451 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 LY6DQ14210 128 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 CTSL3PQ5NE16 218 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 RNASEH2BQ5TBB1 312 aaKnown RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 PAPD7Q5XG87 772 aaKnown RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 CES3Q6UWW8 571 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 NAPRTQ6XQN6 538 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF517Q6ZMY9 492 aaPredicted RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 UNC5BQ8IZJ1 945 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 KRT222Q8N1A0 295 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 LKAAEAR1Q8TD35 194 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 RAD51AP1Q96B01 352 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF669Q96BR6 464 aaPredicted RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 OR2A14Q96R47 310 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 NAPGQ99747 312 aaPredicted RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 INTS7Q9NVH2 962 aaKnown RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 GEMIN8Q9NWZ8 242 aaKnown RBP12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 KLHL42Q9P2K6 505 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 RNF14Q9UBS8 474 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 ASIC3Q9UHC3 531 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 IL17BQ9UHF5 180 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 SAR1BQ9Y6B6 198 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 BSNQ9UPA5 3926 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 PIEZO2Q9H5I5 2752 aa12.89□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZCWPW2A0A1B0GU75 182 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 CTAGE9A4FU28 777 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 TMEM150CB9EJG8 249 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 E5RI56 91 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 E7EQ34 232 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 GOLGA8MH3BSY2 632 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 RASGRF2O14827 1237 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 NKX2-8O15522 239 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 TTC4O95801 387 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 S1PR4O95977 384 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 NTRK1P04629 796 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 TPBGLP0DKB5 382 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 CYP2A7P20853 494 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 CD9P21926 228 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 FMO4P31512 558 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 ITGA1P56199 1179 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 RPS15P62841 145 aaKnown RBP12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 COL9A2Q14055 689 aaPredicted RBP12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 LONRF1Q17RB8 773 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 TTLL9Q3SXZ7 439 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 IZUMO3Q5VZ72 239 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 ZNF470Q6ECI4 717 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 VRK3Q8IV63 474 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 GPR135Q8IZ08 494 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 OR2L8Q8NGY9 312 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 N4BP2L2Q92802 583 aaPredicted RBP12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 PPM1MQ96MI6 270 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 C17orf62Q9BQA9 187 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 FAM167BQ9BTA0 163 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 MENTQ9BUN1 341 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 CCDC68Q9H2F9 335 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 SLC39A10Q9ULF5 831 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 MAD1L1Q9Y6D9 718 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 AP1M2Q9Y6Q5 423 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 COL6A6A6NMZ7 2263 aa12.88□□□□□ -0.35
SIRPB3P-201ENST00000340424 USP27XA6NNY8 438 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 ISM1B1AKI9 464 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 GOLGA8KD6RF30 607 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 GOLGA8TH3BQL2 631 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 CCDC188H7C350 402 aa12.87□□□□□ -0.35
SIRPB3P-201ENST00000340424 DNALI1O14645 258 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms