RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ATP13A5Q4VNC0 1218 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 LAIR2Q6ISS4 152 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 CRTC1Q6UUV9 634 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 Q6ZNB5 142 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 PRR23BQ6ZRT6 265 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 DET1Q7L5Y6 550 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 BPIFB6Q8NFQ5 453 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 ABTB1Q969K4 478 aaPredicted RBP13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 FAM162AQ96A26 154 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 TSSK3Q96PN8 268 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 ZBTB18Q99592 522 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 NTMT1Q9BV86 223 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 KAT8Q9H7Z6 458 aaKnown RBP13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 TRBV5-3A0A0A0MS03 114 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 PRAMEF4O60810 478 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 HTR1AP08908 422 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 GJA1P17302 382 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 RPIAP49247 311 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 MYBPC3Q14896 1274 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 PRAMEF9Q5VWM5 478 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 DUS1LQ6P1R4 473 aaKnown RBP13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 MACC1Q6ZN28 852 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 BBS7Q8IWZ6 715 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 SNX19Q92543 992 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 USP7Q93009 1102 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 PAIP1Q9H074 479 aaKnown RBP13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 CDH7Q9ULB5 785 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 PDE10AQ9Y233 779 aa13.11□□□□□ -0.31
TUBA1B-201ENST00000332858 ZNF701M0R085 212 aaPredicted RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 GMNNO75496 209 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 EBLN1P0CF75 366 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 PFKLP17858 780 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 MSH3P20585 1137 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 NR4A1P22736 598 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CRHBPP24387 322 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 PPP2R2BQ00005 443 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 HSPA14Q0VDF9 509 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CACHD1Q5VU97 1274 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 LRRC66Q68CR7 880 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 ZC3H7AQ8IWR0 971 aaKnown RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 NCLNQ969V3 563 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 TRMT2BQ96GJ1 504 aaKnown RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CSF3RQ99062 836 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 BARD1Q99728 777 aaKnown RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 C2orf49Q9BVC5 232 aaPredicted RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 OSBPL10Q9BXB5 764 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 LHPPQ9H008 270 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 C1orf109Q9NX04 203 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 ARL15Q9NXU5 204 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 AASSQ9UDR5 926 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 PPT2Q9UMR5 302 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 SLC28A1O00337 649 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 IFRD1O00458 451 aaPredicted RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 AXIN1O15169 862 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 PFDN1O60925 122 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 MTX2O75431 263 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 IL6P05231 212 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 LHCGRP22888 699 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 SPAM1P38567 509 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 PTSQ03393 145 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 KCNAB2Q13303 367 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 RETSATQ6NUM9 610 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 ZNF773Q6PK81 442 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 THAP5Q7Z6K1 395 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 GALNT10Q86SR1 603 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 OR13F1Q8NGS4 319 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 MYLIPQ8WY64 445 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 THAP11Q96EK4 314 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 BEGAINQ9BUH8 593 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 HTATIP2Q9BUP3 242 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 UGT2B28Q9BY64 529 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 SMG9Q9H0W8 520 aaKnown RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 GPRC5BQ9NZH0 403 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 DNAJB9Q9UBS3 223 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CD84Q9UIB8 345 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 FAF1Q9UNN5 650 aaPredicted RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 ERVK-11Q9UQG0 969 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 GNGT2O14610 69 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 HOXA2O43364 376 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CREG1O75629 220 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CLDN9O95484 217 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CPNE6O95741 557 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 SERPINA1P01009 418 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 PTPN6P29350 595 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 GZMMP51124 257 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CBX2Q14781 532 aaPredicted RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 TBC1D15Q8TC07 691 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 SKA2Q8WVK7 121 aaPredicted RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 DCAF13Q9NV06 445 aaKnown RBP13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 VNN3Q9NY84 501 aa13.1□□□□□ -0.31
TUBA1B-201ENST00000332858 NEK5Q6P3R8 708 aa13.09□□□□□ -0.31
TUBA1B-201ENST00000332858 GAREM2Q75VX8 874 aa13.09□□□□□ -0.31
TUBA1B-201ENST00000332858 MICU2Q8IYU8 434 aa13.09□□□□□ -0.31
TUBA1B-201ENST00000332858 CHPFQ8IZ52 775 aa13.09□□□□□ -0.31
TUBA1B-201ENST00000332858 LEMD2Q8NC56 503 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms