RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 FAM46CQ5VWP2 391 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 OR4F3Q6IEY1 312 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 SLC8B1Q6J4K2 584 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PATL1Q86TB9 770 aaKnown RBP13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PACRGLQ8N7B6 248 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 SLC29A3Q9BZD2 475 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 MARCH5Q9NX47 278 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 PTTG2Q9NZH5 202 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ATXN10Q9UBB4 475 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 DNAJB9Q9UBS3 223 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 RAB23Q9ULC3 237 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 ANGPT4Q9Y264 503 aa13.12□□□□□ -0.31
PCDHB9-201ENST00000316105 SMAD6O43541 496 aaKnown RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 NFATC1O95644 943 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 ENO2P09104 434 aaPredicted RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 CBSLP0DN79 551 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 CD70P32970 193 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 CBSP35520 551 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 RAB33AQ14088 237 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 PGM2L1Q6PCE3 622 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 KLHDC10Q6PID8 442 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 GET4Q7L5D6 327 aaPredicted RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 SPNS2Q8IVW8 549 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 TEX26Q8N6G2 289 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 TMBIM1Q969X1 311 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 LRCH3Q96II8 777 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 RASSF1Q9NS23 344 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 NME4O00746 187 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 BCKDKO14874 412 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 WNT9AO14904 365 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 PENKP01210 267 aaPredicted RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 YAP1P46937 504 aaKnown RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 INHBCP55103 352 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 SRSF11Q05519 484 aaKnown RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 DAG1Q14118 895 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 ABRAXAS2Q15018 415 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 PAGE2Q7Z2X7 111 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 TRIM69Q86WT6 500 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 MFSD6LQ8IWD5 586 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 RGL4Q8IZJ4 473 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 MINDY1Q8N5J2 469 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 PHF10Q8WUB8 498 aaKnown RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 CLSTN3Q9BQT9 956 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 VPS29Q9UBQ0 182 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 RAPGEFL1Q9UHV5 662 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 OAS3Q9Y6K5 1087 aaKnown RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 RGS5O15539 181 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 FGF4P08620 206 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 BPIP17213 487 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 VIPR1P32241 457 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 MAPK9P45984 424 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 ERVPABLB-1P60509 514 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 CCNYL2Q5T2Q4 361 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 TMC5Q6UXY8 1006 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 HACD2Q6Y1H2 254 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 LARP4Q71RC2 724 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 OR7A2PQ8NGA2 310 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 OR10Q1Q8NGQ4 319 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 CEP295NLQ96MC4 621 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 ATOH8Q96SQ7 321 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 NDEL1Q9GZM8 345 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 IMP3Q9NV31 184 aaKnown RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 H2AFY2Q9P0M6 372 aaPredicted RBP13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 NUMBLQ9Y6R0 609 aa13.11□□□□□ -0.31
PCDHB9-201ENST00000316105 FABP3P05413 133 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CCDC80Q76M96 950 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 LIMS2Q7Z4I7 341 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CRISPLD1Q9H336 500 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CERS4Q9HA82 394 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CD320Q9NPF0 282 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CCDC177Q9NQR7 707 aaPredicted RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 CCM2LQ9NUG4 571 aaPredicted RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 PHF24Q9UPV7 400 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 OARD1Q9Y530 152 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 INSL6Q9Y581 213 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 UPK3BL1B0FP48 263 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 UPK3BL2E5RIL1 263 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ACADMP11310 421 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 PRPS1L1P21108 318 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ARRB2P32121 409 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 KRT20P35900 424 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 TRPC1P48995 793 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 TGM3Q08188 693 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 TUBB3Q13509 450 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 PTPRRQ15256 657 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ZSCAN5AQ9BUG6 496 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 DUSP26Q9BV47 211 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 SDR39U1Q9NRG7 319 aaPredicted RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 IFT80Q9P2H3 777 aaPredicted RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 IL36AQ9UHA7 158 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 DFNA5O60443 496 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ERAL1O75616 437 aaKnown RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 OR6B1O95007 311 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 PPIGQ13427 754 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 KCTD8Q6ZWB6 473 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ZCCHC7Q8N3Z6 543 aaKnown RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 C11orf65Q8NCR3 313 aa13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 ST13P5Q8NFI4 369 aaPredicted RBP13.1□□□□□ -0.31
PCDHB9-201ENST00000316105 AURKBQ96GD4 344 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms