RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 HIST1H2ADP20671 130 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 PDHA2P29803 388 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 OXTRP30559 389 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 WASP42768 502 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 APOFQ13790 326 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 SELPLGQ14242 412 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 MTX3Q5HYI7 312 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 ZFP1Q6P2D0 407 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 NEK5Q6P3R8 708 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 RASGEF1AQ8N9B8 481 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 VN1R2Q8NFZ6 395 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 TSPAN14Q8NG11 270 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 MIPOL1Q8TD10 442 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 HIST1H2AHQ96KK5 128 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 HIST1H2AJQ99878 128 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 H2AFJQ9BTM1 129 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 TIMMDC1Q9NPL8 285 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 BRWD1Q9NSI6 2320 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 FAF1Q9UNN5 650 aaPredicted RBP12.12□□□□□ -0.47
RNF4-201ENST00000314289 SLC8A2Q9UPR5 921 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 CEPT1Q9Y6K0 416 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 BBIP1A8MTZ0 92 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 PRAMEF4O60810 478 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 CYP2A6P11509 494 aaPredicted RBP12.12□□□□□ -0.47
RNF4-201ENST00000314289 RHDQ02161 417 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 SF1Q15637 639 aaKnown RBP12.12□□□□□ -0.47
RNF4-201ENST00000314289 PRAMEF9Q5VWM5 478 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 EFL1Q7Z2Z2 1120 aaKnown RBP12.12□□□□□ -0.47
RNF4-201ENST00000314289 NPAS3Q8IXF0 933 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 OSCP1Q8WVF1 389 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 CIB1Q99828 191 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 BRINP2Q9C0B6 783 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 MRGBPQ9NV56 204 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 PRKAB1Q9Y478 270 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 IGLV3-16A0A075B6K0 115 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 ZNF197O14709 1029 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 PDYNP01213 254 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 CKMT2P17540 419 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 EMP3P54852 163 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 PRKG2Q13237 762 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 DDX39BQ13838 428 aaKnown RBP12.12□□□□□ -0.47
RNF4-201ENST00000314289 NANOGP8Q6NSW7 305 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 LIPIQ6XZB0 460 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 LPCAT2Q7L5N7 544 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 UBE2Q1Q7Z7E8 422 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 LIX1Q8N485 282 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 DNAJC5GQ8N7S2 189 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 TMEM102Q8N9M5 508 aaPredicted RBP12.12□□□□□ -0.47
RNF4-201ENST00000314289 ASB11Q8WXH4 323 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 MED8Q96G25 268 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 NANOGQ9H9S0 305 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 PARVBQ9HBI1 364 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 GID8Q9NWU2 228 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 RSL24D1Q9UHA3 163 aaKnown RBP12.12□□□□□ -0.47
RNF4-201ENST00000314289 BCAP29Q9UHQ4 241 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 CCL27Q9Y4X3 112 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 GMEB1Q9Y692 573 aa12.12□□□□□ -0.47
RNF4-201ENST00000314289 NUMA1Q14980 2115 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 HEPACAM2A8MVW5 462 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 AKAP10O43572 662 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 LRATO95237 230 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 BDKRB1P46663 353 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 LIPEQ05469 1076 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 ZNF284Q2VY69 593 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 FAM174BQ3ZCQ3 159 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 HENMT1Q5T8I9 393 aaKnown RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 ADNP2Q6IQ32 1131 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 KRT80Q6KB66 452 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 SUSD1Q6UWL2 747 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 TICAM1Q8IUC6 712 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 RAVER1Q8IY67 606 aaKnown RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 TMEM125Q96AQ2 219 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 ALG2Q9H553 416 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 TMEM165Q9HC07 324 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 MANBAO00462 879 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 MMP20O60882 483 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 RPL10P27635 214 aaKnown RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 HOXA9P31269 272 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 HALP42357 657 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 STT3AP46977 705 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 PSMD8P48556 350 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 GSK3BP49841 420 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 DMC1Q14565 340 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 KLHL35Q6PF15 583 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 KIAA0907Q7Z7F0 614 aaPredicted RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 MMAAQ8IVH4 418 aaKnown RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 MINDY1Q8N5J2 469 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 BPIFB1Q8TDL5 484 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 SELENOMQ8WWX9 145 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 HOPXQ9BPY8 73 aaPredicted RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 ACPTQ9BZG2 426 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 SLC32A1Q9H598 525 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 COQ10BQ9H8M1 238 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 MARK1Q9P0L2 795 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 THEGQ9P2T0 379 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 CNOT6Q9ULM6 557 aaKnown RBP12.11□□□□□ -0.47
RNF4-201ENST00000314289 PCDHA9Q9Y5H5 950 aa12.11□□□□□ -0.47
RNF4-201ENST00000314289 C7orf72A4D263 438 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms