RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 KCNAB2Q13303 367 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 DEFB109BQ30KR1 87 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 UNC5DQ6UXZ4 953 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 LRRC6Q86X45 466 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 SPNS2Q8IVW8 549 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 DSELQ8IZU8 1212 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 C19orf47Q8N9M1 422 aaKnown RBP19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 IL17FQ96PD4 163 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 SLC25A18Q9H1K4 315 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 CHST8Q9H2A9 424 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 ACTL8Q9H568 366 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 GALPQ9UBC7 116 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 CIDEBQ9UHD4 219 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 MED16Q9Y2X0 877 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 NFS1Q9Y697 457 aa19.14■□□□□ 0.65
PDZRN3-202ENST00000308537 RELNP78509 3460 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 A0A0J9YY10 115 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 FAM237BA0A1B0GVD1 139 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 KRT87PA6NCN2 255 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 CES2O00748 559 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 NIPSNAP2O75323 286 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 APOA4P06727 396 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 F7P08709 466 aaPredicted RBP19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 OGNP20774 298 aaKnown RBP19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 GCGRP47871 477 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 RAB28P51157 221 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 IL10RAQ13651 578 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 ERV3-1Q14264 604 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 SLC5A12Q1EHB4 618 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 CCSMST1Q4G0I0 132 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 IZUMO3Q5VZ72 239 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 FAM198BQ6UWH4 519 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 DCUN1D3Q8IWE4 304 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 FAM20CQ8IXL6 584 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 SIGLEC10Q96LC7 697 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 TRMT1Q9NXH9 659 aaKnown RBP19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 GNPTGQ9UJJ9 305 aa19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 RUVBL2Q9Y230 463 aaKnown RBP19.13■□□□□ 0.65
PDZRN3-202ENST00000308537 HEATR5BQ9P2D3 2071 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 F8W8V4 182 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 MEN1O00255 615 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 FANCGO15287 622 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 KATNA1O75449 491 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 NDUFS3O75489 264 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 SFTPCP11686 197 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 CD9P21926 228 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 PTPN4P29074 926 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 FNTAP49354 379 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 EIF3BP55884 814 aaKnown RBP19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 KIR2DS3Q14952 304 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 DEFB110Q30KQ9 67 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 ANKRD20A4Q4UJ75 823 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 PTRHD1Q6GMV3 140 aaKnown RBP19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 CILP2Q8IUL8 1156 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 DNAJC22Q8N4W6 341 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 ADAMTS17Q8TE56 1095 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 DENND1AQ8TEH3 1009 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 APOBEC4Q8WW27 367 aaKnown RBP19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 PANX3Q96QZ0 392 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 TCF12Q99081 682 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 TSSK1BQ9BXA7 367 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 GPR87Q9BY21 358 aa19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 UBR5O95071 2799 aaPredicted RBP19.12■□□□□ 0.65
PDZRN3-202ENST00000308537 GOLGA8MH3BSY2 632 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 ZSCAN12O43309 604 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 SUV39H1O43463 412 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 C1orf105O95561 183 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 S1PR4O95977 384 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 RNASEH2BQ5TBB1 312 aaKnown RBP19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 FAM69BQ5VUD6 431 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 MRNIPQ6NTE8 343 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 OR2L8Q8NGY9 312 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 CFAP61Q8NHU2 1237 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 MR1Q95460 341 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 TCTN2Q96GX1 697 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 NAP1L3Q99457 506 aaPredicted RBP19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 SLC30A3Q99726 388 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 ACTR5Q9H9F9 607 aaPredicted RBP19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 FANCEQ9HB96 536 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 XAB2Q9HCS7 855 aaKnown RBP19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 CRYL1Q9Y2S2 319 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 PCM1Q15154 2024 aa19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 ASH1LQ9NR48 2969 aaKnown RBP19.11■□□□□ 0.65
PDZRN3-202ENST00000308537 SDR42E2A6NKP2 422 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 K7EM74 188 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 RASGRF2O14827 1237 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 ZNF749O43361 778 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 MATN4O95460 622 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 IVDP26440 423 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 FMO4P31512 558 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 PTGIRP43119 386 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 BDKRB1P46663 353 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 ITGA1P56199 1179 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 SARNPP82979 210 aaKnown RBP19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 UGT8Q16880 541 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 NEPROQ6NW34 567 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 DENND6AQ8IWF6 608 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 SYTL1Q8IYJ3 562 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 GIMAP7Q8NHV1 300 aa19.1■□□□□ 0.65
PDZRN3-202ENST00000308537 SLCO2A1Q92959 643 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms