RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 UGT1A7Q9HAW7 530 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 UGT1A10Q9HAW8 530 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 UGT1A8Q9HAW9 530 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 LIMD1Q9UGP4 676 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 OTOFQ9HC10 1997 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 DUXAA6NLW8 204 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 M0QYT0 321 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ARNTLO00327 626 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SULT1C2O00338 296 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SCAMP1O15126 338 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 GALP22466 123 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 RAG2P55895 527 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 EMX2Q04743 252 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ADAM15Q13444 863 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 VEZF1Q14119 521 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 DSG2Q14126 1118 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 DALRD3Q5D0E6 543 aaKnown RBP5.15□□□□□ -1.58
SCN1A-201ENST00000303395 GLB1LQ6UWU2 654 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 VSIG10LQ86VR7 867 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 CYP4X1Q8N118 509 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 CBR4Q8N4T8 237 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ZNF709Q8N972 641 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 OR10T2Q8NGX3 314 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 STYXQ8WUJ0 223 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 GAB3Q8WWW8 586 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 RCN3Q96D15 328 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 MEAF6Q9HAF1 191 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 CHST7Q9NS84 486 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 MGAT4BQ9UQ53 548 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 NUP205Q92621 2012 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 OTOL1A6NHN0 477 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-201ENST00000303395 GPR182O15218 404 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 RAMP2O60895 175 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 MAFO75444 373 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-201ENST00000303395 PSIP1O75475 530 aaKnown RBP5.15□□□□□ -1.58
SCN1A-201ENST00000303395 CRTAPO75718 401 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-201ENST00000303395 GNAO1P09471 354 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 LINGO3P0C6S8 592 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 STAG3L1P0CL83 205 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 NOVP48745 357 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SLC5A3P53794 718 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 OVGP1Q12889 678 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 RUNX2Q13950 521 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 KCNJ8Q15842 424 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 RNF220Q5VTB9 566 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 AGAP6Q5VW22 663 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 RTL6Q6ICC9 239 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 LGI2Q8N0V4 545 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 NDNFQ8TB73 568 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SLC13A3Q8WWT9 602 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 HAS1Q92839 578 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 UFD1Q92890 307 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 FAM136AQ96C01 138 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 SLC47A1Q96FL8 570 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 AGAP4Q96P64 663 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 PHF12Q96QT6 1004 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 MMP19Q99542 508 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 NPAS2Q99743 824 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 PDCD2LQ9BRP1 358 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 IL25Q9H293 177 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ISYNA1Q9NPH2 558 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ACOT13Q9NPJ3 140 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 ALKBH4Q9NXW9 302 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 TEX264Q9Y6I9 313 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 OAS3Q9Y6K5 1087 aaKnown RBP5.15□□□□□ -1.58
SCN1A-201ENST00000303395 AHCTF1Q8WYP5 2266 aa5.15□□□□□ -1.58
SCN1A-201ENST00000303395 CAPN8A6NHC0 703 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 PMPCBO75439 489 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 JRKO75564 520 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 GRAP2O75791 330 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 RASGRP1O95267 797 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 LATS1O95835 1130 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 CHRNA1P02708 482 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 FGF4P08620 206 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 HLA-EP13747 358 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 PEX2P28328 305 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 ADORA2BP29275 332 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 GRK5P34947 590 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 OR2B6P58173 313 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 SLC1A5Q15758 541 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 ERFEQ4G0M1 354 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 WDR53Q7Z5U6 358 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF382Q96SR6 550 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 POTEKPQ9BYX7 375 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 IFT46Q9NQC8 304 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 POLE4Q9NR33 117 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 MTRRQ9UBK8 725 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 NENFQ9UMX5 172 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 NUMBLQ9Y6R0 609 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 GLI3P10071 1580 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 COL22A1Q8NFW1 1626 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-201ENST00000303395 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-201ENST00000303395 GABBR2O75899 941 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 SLC16A8O95907 504 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 LTFP02788 710 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 NR2F1P10589 423 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 SLC2A4P14672 509 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 RPL4P36578 427 aaKnown RBP5.15□□□□□ -1.59
SCN1A-201ENST00000303395 MAGEA3P43357 314 aa5.15□□□□□ -1.59
SCN1A-201ENST00000303395 BRCC3P46736 316 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms