RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ITPRIPL2Q3MIP1 535 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 WDR45BQ5MNZ6 344 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF627Q7L945 461 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 CAPSLQ8WWF8 208 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 SCAMP4Q969E2 229 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 MOCOSQ96EN8 888 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 GJD2Q9UKL4 321 aa7.65□□□□□ -1.19
SCN9A-201ENST00000303354 TFECO14948 347 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 DHX15O43143 795 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TMCC2O75069 709 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 PDE9AO76083 593 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 BCHEP06276 602 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ATP6V0D1P61421 351 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 IL10RBQ08334 325 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 DCST1Q5T197 706 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ADGRD2Q7Z7M1 963 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 FOXRED2Q8IWF2 684 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 VNN3Q9NY84 501 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 COMMD9Q9P000 198 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SERTAD3Q9UJW9 196 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ZMYM2Q9UBW7 1377 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 GSC2O15499 205 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 PDPK1O15530 556 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 PCDH7O60245 1069 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 OR7A10O76100 309 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 IPO13O94829 963 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SCGB1D2O95969 90 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ALADP13716 330 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ATP1B2P14415 290 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ITGA2P17301 1181 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 IL18R1Q13478 541 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 POTEHQ6S545 545 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ALG3Q92685 438 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 IRF7Q92985 503 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CCM2Q9BSQ5 444 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 STRADBQ9C0K7 418 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CLEC4MQ9H2X3 399 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 IL23AQ9NPF7 189 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 UTS2RQ9UKP6 389 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TIMM8BQ9Y5J9 83 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 A0A0U1RQF3 1178 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 UBXN7O94888 489 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ARSAP15289 507 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ADSSP30520 456 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ARFIP1P53367 373 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 KCNJ2P63252 427 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 DEFB103AP81534 67 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 BNIP1Q12981 228 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 FAM131AQ6UXB0 335 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 OR2T12Q8NG77 320 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CHIAQ9BZP6 476 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TLR6Q9Y2C9 796 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 FKBP6O75344 327 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ETS2P15036 469 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 RBMS1P29558 406 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ARRB1P49407 418 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ENTPD1P49961 510 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 NDST2P52849 883 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 RPS13P62277 151 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 GHRHRQ02643 423 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TAF1AQ15573 450 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 QPCTQ16769 361 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SLC26A9Q7LBE3 791 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SETD9Q8NE22 299 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 RP9Q8TA86 221 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TRMT10AQ8TBZ6 339 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 KLHL6Q8WZ60 621 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ART4Q93070 314 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 HCN4Q9Y3Q4 1203 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CICQ96RK0 1608 aaPredicted RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 K7ERQ8 282 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 HSF2Q03933 536 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CBX3Q13185 183 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 DGLUCYQ7Z3D6 616 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CNPY4Q8N129 248 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CPT1BQ92523 772 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CCDC120Q96HB5 630 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 TMA7Q9Y2S6 64 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 YARS2Q9Y2Z4 477 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 MROH2AA6NES4 1674 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 FAM237AA0A1B0GTK4 181 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 MED26O95402 600 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ENDOUP21128 410 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 MNDAP41218 407 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 LAPTM5Q13571 262 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SLC1A5Q15758 541 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SMAD2Q15796 467 aaKnown RBP7.64□□□□□ -1.19
SCN9A-201ENST00000303354 DGUOKQ16854 277 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 MBOAT1Q6ZNC8 495 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SLC9B2Q86UD5 537 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 IGFN1Q86VF2 1251 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 DNAAF1Q8NEP3 725 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SDCBP2Q9H190 292 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 DCLRE1BQ9H816 532 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 ARL8BQ9NVJ2 186 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 DHRS7Q9Y394 339 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 SALL3Q9BXA9 1300 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 FRMPD1Q5SYB0 1578 aa7.64□□□□□ -1.19
SCN9A-201ENST00000303354 CIB4A0PJX0 185 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms