RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 SCARB2Q14108 478 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ECM1Q16610 540 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SLC44A3Q8N4M1 653 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 DUSP26Q9BV47 211 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CHRAC1Q9NRG0 131 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SNTG1Q9NSN8 517 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 A0A1W2PQH9 124 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 NUAK1O60285 661 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 PQBP1O60828 265 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ARF4P18085 180 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 MAXP61244 160 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 S100A12P80511 92 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 GOLM1Q8NBJ4 401 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 THAP6Q8TBB0 222 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 HDAC2Q92769 488 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 OSTF1Q92882 214 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 P2RX2Q9UBL9 471 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CMAHPQ9Y471 501 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SHROOM3Q8TF72 1996 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CDK5RAP2Q96SN8 1893 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF208O43345 1280 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 B3GALT2O43825 422 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CSTF2P33240 577 aaKnown RBP eCLIP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 MSX2P35548 267 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 BTN3A2P78410 334 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SP140Q13342 867 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 PPM1JQ5JR12 505 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CRYBG2Q8N1P7 616 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 OR52J3Q8NH60 311 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 KLHL6Q8WZ60 621 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ZUFSPQ96AP4 578 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ZSWIM3Q96MP5 696 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 HNRNPABQ99729 332 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 NDC1Q9BTX1 674 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 GATA5Q9BWX5 397 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ITM2CQ9NQX7 267 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SLC7A8Q9UHI5 535 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 LAMB1P07942 1786 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SIGLEC1Q9BZZ2 1709 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 EI24O14681 340 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 RAB36O95755 333 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 GSTT2P0CG29 244 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 RPS14P62263 151 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SLC9B1Q4ZJI4 515 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 FAAH2Q6GMR7 532 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF367Q7RTV3 350 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SMG8Q8ND04 991 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TSPEARQ8WU66 669 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SLC39A3Q9BRY0 314 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TMEM59LQ9UK28 342 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 KIF13AQ9H1H9 1805 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 DLGAP1O14490 977 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 IL12BP29460 328 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ARL2P36404 184 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CCR8P51685 355 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TARDBPQ13148 414 aaKnown RBP eCLIP7.5□□□□□ -1.212e-12■■■■□ 25.1
SF3B3-201ENST00000302516 USP50Q70EL3 339 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 CCDC28AQ8IWP9 274 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SPACA7Q96KW9 195 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF641Q96N77 438 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 COL21A1Q96P44 957 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF317Q96PQ6 595 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TMEM165Q9HC07 324 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 OAZ3Q9UMX2 235 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 A8MX80 341 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TLR4O00206 839 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 FMO3P31513 532 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 DNAJB13P59910 316 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 SMAD3P84022 425 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 UGCGQ16739 394 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 VMACQ2NL98 169 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 DNM1P34Q6PK57 102 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TIFABQ6ZNK6 161 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 DEFB128Q7Z7B8 93 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 GTPBP3Q969Y2 492 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 ACBD6Q9BR61 282 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 IFT27Q9BW83 186 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TM6SF2Q9BZW4 377 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TM9SF3Q9HD45 589 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 LYARQ9NX58 379 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 RBMX2Q9Y388 322 aaKnown RBP7.5□□□□□ -1.21
SF3B3-201ENST00000302516 TESMINQ9Y4I5 508 aa7.5□□□□□ -1.21
SF3B3-201ENST00000302516 FAM159BA6NKW6 160 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 OR2AG2A6NM03 316 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ISM1B1AKI9 464 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF487B1APH4 448 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 TBX10O75333 385 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 C1RP00736 705 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 LCN1P31025 176 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 ADCYAP1R1P41586 468 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 INHBEP58166 350 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 DSG2Q14126 1118 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 PON3Q15166 354 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 C4orf46Q504U0 113 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 SLC30A6Q6NXT4 461 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 OTOP3Q7RTS5 596 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 AVL9Q8NBF6 648 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 KAT2AQ92830 837 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 SNX27Q96L92 541 aa7.49□□□□□ -1.21
SF3B3-201ENST00000302516 FRMD6Q96NE9 622 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms