RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 PRKD3O94806 890 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 ABLIM3O94929 683 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 GUCA1CO95843 209 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 TRBC1P01850 177 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 RPL17P18621 184 aaKnown RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 ACRV1P26436 265 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 OR1D2P34982 312 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 DCTP40126 519 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 PIK3CGP48736 1102 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 RGS4P49798 205 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 HNRNPFP52597 415 aaKnown RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 ISL1P61371 349 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 PLIN5Q00G26 463 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 TWF1Q12792 350 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 EPS8Q12929 822 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 BNIP3Q12983 259 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 SHHQ15465 462 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 DPY19L1Q2PZI1 675 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 ZXDCQ2QGD7 858 aaPredicted RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 ZC3H12BQ5HYM0 836 aaKnown RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 XKR5Q6UX68 686 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 DET1Q7L5Y6 550 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 TMEM150AQ86TG1 271 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 CLEC4FQ8N1N0 589 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 CBARPQ8N350 705 aaPredicted RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 ZBTB2Q8N680 514 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 DNAJB8Q8NHS0 232 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 FBXO30Q8TB52 745 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 TBC1D20Q96BZ9 403 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 THAP11Q96EK4 314 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 SLC47A1Q96FL8 570 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 TRMT2BQ96GJ1 504 aaKnown RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 GDF15Q99988 308 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 SLC29A3Q9BZD2 475 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 DPY30Q9C005 99 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 LRTM1Q9HBL6 345 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 TRPM5Q9NZQ8 1165 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 OPTCQ9UBM4 332 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 LIMD1Q9UGP4 676 aa12.17□□□□□ -0.46
BEST3-201ENST00000266661 AFF4Q9UHB7 1163 aaKnown RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
BEST3-201ENST00000266661 ANKRD12Q6UB98 2062 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 KCNE1BA0A087WTH5 132 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 FFAR3O14843 346 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 SLC16A6O15403 523 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 GPR42O15529 346 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 TBL1XO60907 577 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 ULK1O75385 1050 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 CREG1O75629 220 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 CST1P01037 141 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 IRF1P10914 325 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 BCKDHAP12694 445 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 IL7RP16871 459 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 ZNF182P17025 639 aaPredicted RBP12.16□□□□□ -0.46
BEST3-201ENST00000266661 BPIP17213 487 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 ITGB6P18564 788 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 CCNA2P20248 432 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 UGT1A1P22309 533 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 UGT1A4P22310 534 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 ACVR2AP27037 513 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 UGT1A3P35503 534 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 UGT1A5P35504 534 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 GGT5P36269 586 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 CSNK1DP48730 415 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 BMXP51813 675 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 MLLT10P55197 1068 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 RAB15P59190 212 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 CD47Q08722 323 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 KCNAB2Q13303 367 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 CDKL4Q5MAI5 379 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 TMEM240Q5SV17 173 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 LYPLAL1Q5VWZ2 237 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.16□□□□□ -0.46
BEST3-201ENST00000266661 Q6ZNB5 142 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 NPAS4Q8IUM7 802 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 ZC3H7AQ8IWR0 971 aaKnown RBP12.16□□□□□ -0.46
BEST3-201ENST00000266661 FAM217AQ8IXS0 508 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 DCAF4L2Q8NA75 395 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 OR5K1Q8NHB7 308 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 MUL1Q969V5 352 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 SH3GL1Q99961 368 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 RBM4BQ9BQ04 359 aaKnown RBP12.16□□□□□ -0.46
BEST3-201ENST00000266661 CLSTN3Q9BQT9 956 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 THUMPD3Q9BV44 507 aaKnown RBP12.16□□□□□ -0.46
BEST3-201ENST00000266661 RBM4Q9BWF3 364 aaKnown RBP12.16□□□□□ -0.46
BEST3-201ENST00000266661 KCNH6Q9H252 994 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 ASB8Q9H765 288 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 ZFYVE1Q9HBF4 777 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 IL23AQ9NPF7 189 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 KLHL42Q9P2K6 505 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 KLQ9UEF7 1012 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 PSME2Q9UL46 239 aa12.16□□□□□ -0.46
BEST3-201ENST00000266661 ZNF490Q9ULM2 529 aaPredicted RBP12.16□□□□□ -0.46
BEST3-201ENST00000266661 A0A096LPI6 279 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.15□□□□□ -0.46
BEST3-201ENST00000266661 SMAD6O43541 496 aaKnown RBP12.15□□□□□ -0.46
BEST3-201ENST00000266661 ERN1O75460 977 aaKnown RBP12.15□□□□□ -0.46
BEST3-201ENST00000266661 ZNF821O75541 412 aaPredicted RBP12.15□□□□□ -0.46
BEST3-201ENST00000266661 PCMT1P22061 227 aa12.15□□□□□ -0.46
BEST3-201ENST00000266661 PRPH2P23942 346 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms