RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 ANKRD60Q9BZ19 345 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 NECTIN3Q9NQS3 549 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 POLE4Q9NR33 117 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 FAM105AQ9NUU6 356 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 FFAR2O15552 330 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 MSCO60682 206 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 MTRF1O75570 445 aaKnown RBP10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 NUDT14O95848 222 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 AKR1A1P14550 325 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 GM2AP17900 193 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 CYP3A5P20815 502 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 SSR2P43308 183 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 SLC9A3P48764 834 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 PNLIPRP1P54315 467 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 LILRA4P59901 499 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 HMGCS1Q01581 520 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 RIPPLY1Q0D2K3 151 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 SCRN3Q0VDG4 424 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 SWI5Q1ZZU3 235 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 PLEKHG7Q6ZR37 379 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 USP50Q70EL3 339 aaPredicted RBP10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 SLC15A4Q8N697 577 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 PIGXQ8TBF5 258 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 ZNF431Q8TF32 576 aaPredicted RBP10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 PSMG2Q969U7 264 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 IL4I1Q96RQ9 567 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 MAPKAP1Q9BPZ7 522 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 MAGEH1Q9H213 219 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 CPNE5Q9HCH3 593 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 PCDHGA11Q9Y5H2 935 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 RFC2P35250 354 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 RGS8P57771 180 aaPredicted RBP10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 MRPS6P82932 125 aaKnown RBP10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 SULT2A1Q06520 285 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 TAF1AQ15573 450 aaPredicted RBP10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 C9orf64Q5T6V5 341 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 C17orf64Q86WR6 236 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 TXNDC5Q8NBS9 432 aaKnown RBP10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 LPPQ93052 612 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 SOX17Q9H6I2 414 aaPredicted RBP10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 USP29Q9HBJ7 922 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 TM9SF3Q9HD45 589 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 ASF1AQ9Y294 204 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 GRIP1Q9Y3R0 1128 aa10.62□□□□□ -0.71
CSNK1A1-201ENST00000261798 CENPBD1B2RD01 187 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 INSIG1O15503 277 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 BMP2P12643 396 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 CLCN4P51793 760 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 PPP5CP53041 499 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 TARDBPQ13148 414 aaKnown RBP eCLIP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 PAFAH1B3Q15102 231 aaKnown RBP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 PTGES3Q15185 160 aaKnown RBP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 HACD2Q6Y1H2 254 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 FBXO27Q8NI29 283 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 ADAMTS15Q8TE58 950 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 ZNF717Q9BY31 904 aaPredicted RBP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 SEC14L4Q9UDX3 406 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 NCKAP1Q9Y2A7 1128 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 GOLGA4Q13439 2230 aaKnown RBP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 PDHXO00330 501 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 HOXD12P35452 270 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 SMAD3P84022 425 aaKnown RBP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 NANOGP8Q6NSW7 305 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 MED27Q6P2C8 311 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 GALNT6Q8NCL4 622 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 AP2M1Q96CW1 435 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 PCED1BQ96HM7 432 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 CHIAQ9BZP6 476 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 NANOGQ9H9S0 305 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 THUMPD1Q9NXG2 353 aaKnown RBP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 PCDHGC4Q9Y5F7 938 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 PITPNM1O00562 1244 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 KDM4BO94953 1096 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 IFNA6P05013 189 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 GSTT2BP0CG30 244 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 GRIA2P42262 883 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 ETV4P43268 484 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 MAGEA2P43356 314 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 TUSC3Q13454 348 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 ASB18Q6ZVZ8 466 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 SERPINA9Q86WD7 417 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 SLC15A3Q8IY34 581 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 CDK15Q96Q40 435 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 FUNDC2Q9BWH2 189 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 GTPBP2Q9BX10 602 aaKnown RBP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 FLRT1Q9NZU1 646 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 ZNF541Q9H0D2 1346 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 OR51F1A6NGY5 319 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 RIIAD1A6NNX1 92 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 ZNF806P0C7X5 589 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 SAGP10523 405 aaPredicted RBP10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 HDCP19113 662 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 LMO2P25791 158 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 GSTM2P28161 218 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 HTR1EP28566 365 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 SGCGQ13326 291 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 SMCO1Q147U7 214 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 SNX33Q8WV41 574 aa10.61□□□□□ -0.71
CSNK1A1-201ENST00000261798 HAPLN3Q96S86 360 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms