RNA–Protein interactions for RNA: ENST00000261647.9

TTC19-201, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC19, Length 3,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-201ENST00000261647 RAD51BO15315 384 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 HLA-DPA1P20036 260 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 ZNF140P52738 457 aaPredicted RBP18.39■□□□□ 0.53
TTC19-201ENST00000261647 RUNDC3AQ59EK9 446 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 ZRANB3Q5FWF4 1079 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 NKAPQ8N5F7 415 aaKnown RBP18.39■□□□□ 0.53
TTC19-201ENST00000261647 EFHBQ8N7U6 833 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 OR52E6Q96RD3 313 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 DPY30Q9C005 99 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 KAT8Q9H7Z6 458 aaKnown RBP18.39■□□□□ 0.53
TTC19-201ENST00000261647 TPRKBQ9Y3C4 175 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 CCL27Q9Y4X3 112 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 PLXNB2O15031 1838 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 RGS10O43665 173 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 VPS26AO75436 327 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 ODC1P11926 461 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 AKT1P31749 480 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 GRK5P34947 590 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 CLK1P49759 484 aaKnown RBP18.39■□□□□ 0.53
TTC19-201ENST00000261647 SERINC3Q13530 473 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 GTF2H2Q13888 395 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 PCBP1Q15365 356 aaKnown RBP eCLIP18.39■□□□□ 0.53
TTC19-201ENST00000261647 OVOS1Q6IE37 1185 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 GTF2H2CQ6P1K8 395 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 GPR149Q86SP6 731 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 SPATA2LQ8IUW3 424 aaPredicted RBP18.39■□□□□ 0.53
TTC19-201ENST00000261647 ATL1Q8WXF7 558 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 ZNF566Q969W8 418 aa18.39■□□□□ 0.53
TTC19-201ENST00000261647 NLE1Q9NVX2 485 aaPredicted RBP18.39■□□□□ 0.53
TTC19-201ENST00000261647 A8MV72 311 aaPredicted RBP18.38■□□□□ 0.53
TTC19-201ENST00000261647 DNAJB5O75953 348 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 ALOX12P18054 663 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 MSH3P20585 1137 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 MZF1P28698 734 aaPredicted RBP18.38■□□□□ 0.53
TTC19-201ENST00000261647 GRK4P32298 578 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 CDKN2CP42773 168 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 VTCN1Q7Z7D3 282 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 NLGN4XQ8N0W4 816 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 SLC39A13Q96H72 371 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 DHRS1Q96LJ7 313 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 SERPINB11Q96P15 392 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 NACA2Q9H009 215 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 ILVBLA1L0T0 632 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 HOXB8P17481 243 aaPredicted RBP18.38■□□□□ 0.53
TTC19-201ENST00000261647 PAX3P23760 479 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 HOXA9P31269 272 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 HTR7P34969 479 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 CREMQ03060 361 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 FAM120BQ96EK7 910 aaKnown RBP18.38■□□□□ 0.53
TTC19-201ENST00000261647 PYURFQ96I23 114 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 TINF2Q9BSI4 451 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 SCN3BQ9NY72 215 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 EIF3LQ9Y262 564 aaKnown RBP18.38■□□□□ 0.53
TTC19-201ENST00000261647 PCDHGC4Q9Y5F7 938 aa18.38■□□□□ 0.53
TTC19-201ENST00000261647 PABPN1LA6NDY0 278 aaKnown RBP18.37■□□□□ 0.53
TTC19-201ENST00000261647 E5RI56 91 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 MFN2O95140 757 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 SCELO95171 688 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 MC4RP32245 332 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 PBX3P40426 434 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 CASP3P42574 277 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 PSEN2P49810 448 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 HUNKP57058 714 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 METTL23Q86XA0 190 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 TTC29Q8NA56 475 aaPredicted RBP18.37■□□□□ 0.53
TTC19-201ENST00000261647 OR7D4Q8NG98 312 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 PROX1Q92786 737 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 C1orf74Q96LT6 269 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 RNF38Q9H0F5 515 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 SIRT5Q9NXA8 310 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 ELOVL2Q9NXB9 296 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 BOLA1Q9Y3E2 137 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 SEC22BO75396 215 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 CCNKO75909 580 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 RECQL5O94762 991 aaPredicted RBP18.37■□□□□ 0.53
TTC19-201ENST00000261647 SERPINF2P08697 491 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 JUNDP17535 347 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 GADD45AP24522 165 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 TRAF3Q13114 568 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 SLC39A12Q504Y0 691 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 GATAD2AQ86YP4 633 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 HIPK1Q86Z02 1210 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 TXNDC15Q96J42 360 aa18.37■□□□□ 0.53
TTC19-201ENST00000261647 PDP1Q9P0J1 537 aaPredicted RBP18.37■□□□□ 0.53
TTC19-201ENST00000261647 LOC100506127A0A0U1RQW1 187 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 PCDHGA12O60330 932 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 VIPP01282 170 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 CRISP3P54108 245 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 RACK1P63244 317 aaKnown RBP18.36■□□□□ 0.53
TTC19-201ENST00000261647 FAM189BP81408 668 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 IL10RBQ08334 325 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 ZNF404Q494X3 552 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 TTC9BQ8N6N2 239 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 DNASE1L2Q92874 299 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 TRIB3Q96RU7 358 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 ZBTB18Q99592 522 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 DDX28Q9NUL7 540 aaKnown RBP18.36■□□□□ 0.53
TTC19-201ENST00000261647 TLR6Q9Y2C9 796 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 DOCK4Q8N1I0 1966 aa18.36■□□□□ 0.53
TTC19-201ENST00000261647 OR2A25A4D2G3 310 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms