RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 RAP1GDS1P52306 607 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 CPSF6Q16630 551 aaKnown RBP eCLIP21.76■■□□□ 1.07
SIX3-201ENST00000260653 ATP6AP1LQ52LC2 224 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 AGTRAPQ6RW13 159 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 FUNDC1Q8IVP5 155 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 KYQ8NBH2 561 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 PPFIBP2Q8ND30 876 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 PREBQ9HCU5 417 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 PRAMEF4O60810 478 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 ENTPD5O75356 428 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 ACADMP11310 421 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 TEAD1P28347 426 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 NAE1Q13564 534 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 SMAD2Q15796 467 aaKnown RBP21.76■■□□□ 1.07
SIX3-201ENST00000260653 FBXO43Q4G163 708 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 SGO1Q5FBB7 561 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 EOGTQ5NDL2 527 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 PRAMEF9Q5VWM5 478 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 DSELQ8IZU8 1212 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 MIER2Q8N344 545 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 CHCHD4Q8N4Q1 142 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 WDR60Q8WVS4 1066 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 MED8Q96G25 268 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 DPEP2Q9H4A9 486 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 SDR39U1Q9NRG7 319 aaPredicted RBP21.76■■□□□ 1.07
SIX3-201ENST00000260653 SLC7A8Q9UHI5 535 aa21.76■■□□□ 1.07
SIX3-201ENST00000260653 TCRBV21S2A2A0A5A6 115 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 SLC31A1O15431 190 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 IDO1P14902 403 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 ACADVLP49748 655 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 ERVK-8P63133 956 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 PLOD1Q02809 727 aaPredicted RBP21.75■■□□□ 1.07
SIX3-201ENST00000260653 NR6A1Q15406 480 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 TMEM31Q5JXX7 168 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 USP30Q70CQ3 517 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 SPATA19Q7Z5L4 167 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 KBTBD6Q86V97 674 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 FNDC5Q8NAU1 212 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 ATL1Q8WXF7 558 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 OR52A5Q9H2C5 316 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 PHPT1Q9NRX4 125 aaPredicted RBP21.75■■□□□ 1.07
SIX3-201ENST00000260653 MMP17Q9ULZ9 603 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 GPR45Q9Y5Y3 372 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 C9JVG2 144 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 MANBAO00462 879 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 LSM1O15116 133 aaKnown RBP21.75■■□□□ 1.07
SIX3-201ENST00000260653 ACADLP28330 430 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 TBL3Q12788 808 aaKnown RBP21.75■■□□□ 1.07
SIX3-201ENST00000260653 KPNB1Q14974 876 aaKnown RBP21.75■■□□□ 1.07
SIX3-201ENST00000260653 MAPRE2Q15555 327 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 SNCBQ16143 134 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 MAP7D1Q3KQU3 841 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 EFCAB3Q8N7B9 438 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 AIG1Q9NVV5 245 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 ZNF490Q9ULM2 529 aaPredicted RBP21.75■■□□□ 1.07
SIX3-201ENST00000260653 NCKAP1Q9Y2A7 1128 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 CCL27Q9Y4X3 112 aa21.75■■□□□ 1.07
SIX3-201ENST00000260653 ULK1O75385 1050 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 FUCA1P04066 466 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 SNRPB2P08579 225 aaKnown RBP21.74■■□□□ 1.07
SIX3-201ENST00000260653 SRFP11831 508 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 MYCLP1P12525 358 aaPredicted RBP21.74■■□□□ 1.07
SIX3-201ENST00000260653 RGS19P49795 217 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 GSTA3Q16772 222 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 Q6ZS52 159 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 THOC6Q86W42 341 aaKnown RBP21.74■■□□□ 1.07
SIX3-201ENST00000260653 OXR1Q8N573 874 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 EFCAB1Q9HAE3 211 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 FBP2O00757 339 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 PDE5AO76074 875 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 ACSL1P33121 698 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 RPS6KA2Q15349 733 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 WASHC2DQ5SRD0 308 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 Q7L0L9 218 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 FBXO15Q8NCQ5 510 aaPredicted RBP21.74■■□□□ 1.07
SIX3-201ENST00000260653 FLCNQ8NFG4 579 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 SLC29A3Q9BZD2 475 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 ZDHHC5Q9C0B5 715 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 PSMD13Q9UNM6 376 aa21.74■■□□□ 1.07
SIX3-201ENST00000260653 SORBS2O94875 1100 aaKnown RBP21.73■■□□□ 1.07
SIX3-201ENST00000260653 GABRG2P18507 467 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 HMGCS1Q01581 520 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 ZRSR2Q15696 482 aaKnown RBP21.73■■□□□ 1.07
SIX3-201ENST00000260653 ICE2Q659A1 982 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 ZNF480Q8WV37 535 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 MTFMTQ96DP5 389 aaKnown RBP21.73■■□□□ 1.07
SIX3-201ENST00000260653 OR4K3Q96R72 315 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 C1QTNF7Q9BXJ2 289 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 SLC2A4RGQ9NR83 387 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 KCNE1BA0A087WTH5 132 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 C7P10643 843 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 TPMTP51580 245 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 CCR3P51677 355 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 ART3Q13508 389 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 TDGQ13569 410 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 GGTA1PQ4G0N0 100 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 REP15Q6BDI9 236 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 PDZD3Q86UT5 571 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 LMNTD1Q8N9Z9 388 aa21.73■■□□□ 1.07
SIX3-201ENST00000260653 L3MBTL4Q8NA19 623 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms