RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 TRNAU1APQ9NX07 287 aaKnown RBP17.32■□□□□ 0.36
IMP4-201ENST00000259239 TBC1D29Q9UFV1 150 aa17.32■□□□□ 0.36
IMP4-201ENST00000259239 PLAGL1Q9UM63 463 aa17.32■□□□□ 0.36
IMP4-201ENST00000259239 TDRKHQ9Y2W6 561 aaKnown RBP17.32■□□□□ 0.36
IMP4-201ENST00000259239 ANGPTL3Q9Y5C1 460 aa17.32■□□□□ 0.36
IMP4-201ENST00000259239 TMEM131Q92545 1883 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 OR52A4PA6NMU1 304 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 MATN2O00339 956 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 ZNF195O14628 629 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 WDR47O94967 919 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 MLYCDO95822 493 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 ALOX15P16050 662 aaPredicted RBP17.31■□□□□ 0.36
IMP4-201ENST00000259239 PRKG2Q13237 762 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 VWA5B1Q5TIE3 1220 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 METTL2BQ6P1Q9 378 aaKnown RBP17.31■□□□□ 0.36
IMP4-201ENST00000259239 LRRC70Q7Z2Q7 622 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 SYVN1Q86TM6 617 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 NRROSQ86YC3 692 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 DCBLD1Q8N8Z6 715 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 PPFIBP2Q8ND30 876 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 OR9A1PQ8NGU1 263 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 MAPK15Q8TD08 544 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 ATL1Q8WXF7 558 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 KCNA7Q96RP8 456 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 EBF4Q9BQW3 602 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 TRIT1Q9H3H1 467 aaKnown RBP17.31■□□□□ 0.36
IMP4-201ENST00000259239 SLC32A1Q9H598 525 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 IPPKQ9H8X2 491 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 IMP3Q9NV31 184 aaKnown RBP17.31■□□□□ 0.36
IMP4-201ENST00000259239 KCNK4Q9NYG8 393 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 SCHIP1Q9P0W5 487 aaPredicted RBP17.31■□□□□ 0.36
IMP4-201ENST00000259239 ZNF225Q9UK10 706 aa17.31■□□□□ 0.36
IMP4-201ENST00000259239 PI4KAP42356 2102 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 OR7A17O14581 309 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 EML2O95834 649 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 RPN2P04844 631 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 JUNP05412 331 aaKnown RBP17.3■□□□□ 0.36
IMP4-201ENST00000259239 ITPKAP23677 461 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 ARL1P40616 181 aaPredicted RBP17.3■□□□□ 0.36
IMP4-201ENST00000259239 FOXA1P55317 472 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 GRB7Q14451 532 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 PDCD2Q16342 344 aaPredicted RBP17.3■□□□□ 0.36
IMP4-201ENST00000259239 WDR45BQ5MNZ6 344 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 TTC23LQ6PF05 361 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 LPCAT2Q7L5N7 544 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 IQCHQ86VS3 1027 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 DCP2Q8IU60 420 aaKnown RBP17.3■□□□□ 0.36
IMP4-201ENST00000259239 PHACTR4Q8IZ21 702 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 DTWD2Q8NBA8 298 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 MAGEC3Q8TD91 643 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 ZNF480Q8WV37 535 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 DNASE2BQ8WZ79 361 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 MED8Q96G25 268 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 PPP1R36Q96LQ0 422 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 CDK15Q96Q40 435 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 ZNF382Q96SR6 550 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 SIKE1Q9BRV8 207 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 TRAF6Q9Y4K3 522 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 LAMA1P25391 3075 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 ATXN2Q99700 1313 aaKnown RBP17.3■□□□□ 0.36
IMP4-201ENST00000259239 TLR4O00206 839 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 HDAC3O15379 428 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 SKAP2O75563 359 aaPredicted RBP17.3■□□□□ 0.36
IMP4-201ENST00000259239 CELA2BP08218 269 aaPredicted RBP17.3■□□□□ 0.36
IMP4-201ENST00000259239 EPB42P16452 691 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 HK2P52789 917 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 ILF3Q12906 894 aaKnown RBP eCLIP17.3■□□□□ 0.36
IMP4-201ENST00000259239 TRAF3Q13114 568 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 NAE1Q13564 534 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 GPRIN3Q6ZVF9 776 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 SPATS2Q86XZ4 545 aaKnown RBP17.3■□□□□ 0.36
IMP4-201ENST00000259239 SYTL1Q8IYJ3 562 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 TBC1D21Q8IYX1 336 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 SNX31Q8N9S9 440 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 LMNTD1Q8N9Z9 388 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 ATP6V1E2Q96A05 226 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 RAD51AP1Q96B01 352 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 IL17FQ96PD4 163 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 FERD3LQ96RJ6 166 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 NRTNQ99748 197 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 NUF2Q9BZD4 464 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 DNAJC28Q9NX36 388 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 SLC22A14Q9Y267 594 aa17.3■□□□□ 0.36
IMP4-201ENST00000259239 CACNA1EQ15878 2313 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 GIPC1O14908 333 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 HGSO14964 777 aaPredicted RBP17.29■□□□□ 0.36
IMP4-201ENST00000259239 AZIN1O14977 448 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 OR4F21O95013 312 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 ESRRBO95718 433 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 CCNG1P51959 295 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 RPE65Q16518 533 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 LETMD1Q6P1Q0 360 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 AFAP1L2Q8N4X5 818 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 GPBAR1Q8TDU6 330 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 GAB3Q8WWW8 586 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 ABCF3Q9NUQ8 709 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 DNAJC11Q9NVH1 559 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 INTS7Q9NVH2 962 aaKnown RBP17.29■□□□□ 0.36
IMP4-201ENST00000259239 VTI1BQ9UEU0 232 aa17.29■□□□□ 0.36
IMP4-201ENST00000259239 APOBEC3BQ9UH17 382 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms