RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 HID1Q8IV36 788 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 AQP12AQ8IXF9 295 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 GPC2Q8N158 579 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 TMEM209Q96SK2 561 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 GPR21Q99679 349 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 ACAT2Q9BWD1 397 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 OR2B2Q9GZK3 357 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 BRD7Q9NPI1 651 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 MRPL42Q9Y6G3 142 aaKnown RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 C5orf51A6NDU8 294 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 H0YJX3 145 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 WNT10BO00744 389 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 CLDN4O14493 209 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 IFI30P13284 250 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF20P17024 532 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 RHEBQ15382 184 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 WSCD2Q2TBF2 565 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 PLEKHG4Q58EX7 1191 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 FAM76BQ5HYJ3 339 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 INTS6LQ5JSJ4 861 aaKnown RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 CDKL4Q5MAI5 379 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 SMARCD3Q6STE5 483 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 ADGRD2Q7Z7M1 963 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 PPP1R13LQ8WUF5 828 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 LRRC58Q96CX6 371 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 PRICKLE1Q96MT3 831 aaPredicted RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 CPXM1Q96SM3 734 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 RAB11FIP5Q9BXF6 653 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 TM6SF2Q9BZW4 377 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 CDT1Q9H211 546 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 CCDC86Q9H6F5 360 aaKnown RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 IPPKQ9H8X2 491 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 RGS17Q9UGC6 210 aaPredicted RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 CPA4Q9UI42 421 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 CDH10Q9Y6N8 788 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 PPEF2O14830 753 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 ERAL1O75616 437 aaKnown RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 RLN2P04090 185 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 LCN1P31025 176 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 PLA2G4EQ3MJ16 856 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 PPM1JQ5JR12 505 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 GALNT13Q8IUC8 556 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 SPERTQ8NA61 448 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 RHBDF1Q96CC6 855 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 LENG8Q96PV6 779 aaPredicted RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 IFT27Q9BW83 186 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF471Q9BX82 626 aaPredicted RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 USP29Q9HBJ7 922 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 MSRAQ9UJ68 235 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 PTBP2Q9UKA9 531 aaKnown RBP4.72□□□□□ -1.65
RC3H1-201ENST00000258349 SPEF1Q9Y4P9 236 aa4.72□□□□□ -1.65
RC3H1-201ENST00000258349 A0A1B0GVM2 712 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 TCAF2A6NFQ2 919 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 ACOX3O15254 700 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 INSIG1O15503 277 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 NOBOXO60393 691 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 PRKD3O94806 890 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 KAT7O95251 611 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 C1RP00736 705 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 HMGN1P05114 100 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 PCCBP05166 539 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 NSG1P42857 185 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 MAGEA12P43365 314 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 SMSP52788 366 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 RFTN1Q14699 578 aaPredicted RBP4.71□□□□□ -1.65
RC3H1-201ENST00000258349 ECM1Q16610 540 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 VMACQ2NL98 169 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 GRHL2Q6ISB3 625 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 ANKRD26P1Q6NSI1 321 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 OTOP3Q7RTS5 596 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 ANKRD46Q86W74 232 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 PM20D2Q8IYS1 436 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 COX18Q8N8Q8 333 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 BRSK1Q8TDC3 778 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 THRSPQ92748 146 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 EXOSC8Q96B26 276 aaKnown RBP4.71□□□□□ -1.65
RC3H1-201ENST00000258349 SLC35A5Q9BS91 424 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 C1orf109Q9NX04 203 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 FZD10Q9ULW2 581 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 CMAHPQ9Y471 501 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 PLIN4Q96Q06 1357 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 CRYBG1Q9Y4K1 1723 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 PIGBOS1A0A0B4J2F0 54 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 SLC15A5A6NIM6 579 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 H3BM21 787 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 hCG_2039718K7EN88 272 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 CBSLP0DN79 551 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 CBSP35520 551 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 SLC1A2P43004 574 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 CASP7P55210 303 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 TARDBPQ13148 414 aaKnown RBP eCLIP4.71□□□□□ -1.659e-9■■■□□ 15.7
RC3H1-201ENST00000258349 LRRC70Q7Z2Q7 622 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 ZBTB8BQ8NAP8 495 aaPredicted RBP4.71□□□□□ -1.65
RC3H1-201ENST00000258349 TMEM165Q9HC07 324 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 SNTG1Q9NSN8 517 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 OXSMQ9NWU1 459 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 MED31Q9Y3C7 131 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 LRRC42Q9Y546 428 aa4.71□□□□□ -1.65
RC3H1-201ENST00000258349 DAPL1A0PJW8 107 aa4.71□□□□□ -1.66
RC3H1-201ENST00000258349 SYN3O14994 580 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms