RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 CILP2Q8IUL8 1156 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 SYT12Q8IV01 421 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 PQLC1Q8N2U9 271 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 TET1Q8NFU7 2136 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 KBTBD8Q8NFY9 601 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 SLC38A3Q99624 504 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 MGME1Q9BQP7 344 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 GTPBP2Q9BX10 602 aaKnown RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 TRIT1Q9H3H1 467 aaKnown RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 IPPKQ9H8X2 491 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 RC3H2Q9HBD1 1191 aaKnown RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 S100A14Q9HCY8 104 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 RAP2CQ9Y3L5 183 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 TIMM22Q9Y584 194 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 NUP205Q92621 2012 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 FAM159BA6NKW6 160 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 A8MUI8 341 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 WASH4PA8MWX3 477 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 LBPP18428 481 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 IL12AP29459 219 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 RGRP47804 291 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 ARSDP51689 593 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 RAB15P59190 212 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 TMEM115Q12893 351 aaPredicted RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 ACAP2Q15057 778 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 TYW3Q6IPR3 259 aaKnown RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 SPRED2Q7Z698 418 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 AKAP14Q86UN6 197 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 CLYBLQ8N0X4 340 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 ZNF276Q8N554 614 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 PNPLA1Q8N8W4 532 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 PRICKLE1Q96MT3 831 aaPredicted RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 DNAJC11Q9NVH1 559 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 SNX8Q9Y5X2 465 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 GREB1LQ9C091 1923 aaPredicted RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 RHPN2P1A8MT19 583 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 S100A9P06702 114 aaKnown RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 HGFP14210 728 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 RPS21P63220 83 aaKnown RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 ARF5P84085 180 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 TRAP1Q12931 704 aaKnown RBP9.23□□□□□ -0.93
CCDC113-201ENST00000219299 NFATC2Q13469 925 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 DGKKQ5KSL6 1271 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 CD300LGQ6UXG3 332 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 ATG14Q6ZNE5 492 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 ZNF605Q86T29 641 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 COL26A1Q96A83 441 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 SCRN2Q96FV2 425 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 KLHDC7BQ96G42 594 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 MARK4Q96L34 752 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 ARL8BQ9NVJ2 186 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 PNPOQ9NVS9 261 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 TRAF6Q9Y4K3 522 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 FOCADQ5VW36 1801 aa9.23□□□□□ -0.93
CCDC113-201ENST00000219299 AGPSO00116 658 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 PAPSS2O95340 614 aaPredicted RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 IL6P05231 212 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 IVDP26440 423 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 HMGCLP35914 325 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 CCR2P41597 374 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 SQLEQ14534 574 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 ARL13AQ5H913 290 aaPredicted RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 EGFLAMQ63HQ2 1017 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 CLNKQ7Z7G1 428 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 TRIM73Q86UV7 250 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 ZNF614Q8N883 585 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 PSMA8Q8TAA3 256 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 HPS1Q92902 700 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 RERGQ96A58 199 aaPredicted RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 NELL2Q99435 816 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 GATA5Q9BWX5 397 aaPredicted RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 FZD3Q9NPG1 666 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 HPS4Q9NQG7 708 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 PTTG2Q9NZH5 202 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 SIRPGQ9P1W8 387 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 RAB26Q9ULW5 256 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 SPTBN2O15020 2390 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 KIF13BQ9NQT8 1826 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 GRID2O43424 1007 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 LINC00032P0C843 101 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 GRIA3P42263 894 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 IRF9Q00978 393 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 TDGQ13569 410 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 CUZD1Q86UP6 607 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 CYP4Z2PQ8N1L4 340 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 ARL10Q8N8L6 244 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 WBP2Q969T9 261 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 FCRL3Q96P31 734 aaPredicted RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 NOL11Q9H8H0 719 aaKnown RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 SPAG4Q9NPE6 437 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 LOXHD1Q8IVV2 1947 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 FAM220BPB1ANY3 271 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 TSPAN6O43657 245 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 OR1I1O60431 355 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 C5AR1P21730 350 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 RPL38P63173 70 aaKnown RBP9.22□□□□□ -0.93
CCDC113-201ENST00000219299 BNIP2Q12982 314 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 DGCR6Q14129 220 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 PARGQ86W56 976 aa9.22□□□□□ -0.93
CCDC113-201ENST00000219299 EFCAB3Q8N7B9 438 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms