RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Srsf2Q62093 221 aaKnown RBP7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Tead4Q62296 427 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 CcncQ62447 283 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Kcnc3Q63959 769 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Nlrp9cQ66X01 1004 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Fbxo27Q6DIA9 280 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Casc4Q6P2L7 435 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Dennd2cQ6P9P8 914 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Naif1Q6PFD7 327 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Cpeb4Q7TN98 729 aaKnown RBP7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Chst14Q80V53 376 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Abhd16bQ80YU0 474 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Disc1Q811T9 852 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ofcc1Q8BGX4 166 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Mblac2Q8BL86 279 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Kyat1Q8BTY1 424 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Cndp1Q8BUG2 492 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Slco2b1Q8BXB6 683 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Peli3Q8BXR6 445 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Lrrtm3Q8BZ81 582 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Slitrk6Q8C110 840 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Tmem154Q8C4Q9 181 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Cabcoco1Q8CDT7 208 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 4932414N04RikQ8CEQ9 752 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Rnf183Q8QZS5 190 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Acsf2Q8VCW8 615 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ndufs2Q91WD5 463 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Akr1c14Q91WT7 323 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Pcdha6Q91Y14 946 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Cox16Q9CR63 106 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Trmt11Q9CWH5 460 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Tmem135Q9CYV5 458 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Klhl35Q9CZ49 574 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Arrdc2Q9D668 407 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ppil6Q9D6D8 278 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Nacc2Q9DCM7 586 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Rnft1Q9DCN7 395 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ube4bQ9ES00 1173 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Nrip2Q9JHR9 270 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Egfl7Q9QXT5 275 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Sh2d3cQ9QZS8 854 aa7.04□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Igkv17-121A0A0G2JFA8 117 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Gm5485A0A1D5RM98 91 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 AgmatA2AS89 358 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 A630010A05RikA9C473 232 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 9630041A04RikD3Z3U4 205 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Gm8113E0CXS8 587 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Dcpp2E9PYC2 171 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Gm8444F6XS56 118 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Gm5689F6Y2A6 97 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Olfr596F8VQ26 312 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Gm3336J3QMQ6 198 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Dcpp1L7N1X9 171 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Vmn2r46L7N282 809 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Gp5O08742 567 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Neu1O35657 409 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Limk2O54785 638 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Fpr-rs3O88537 343 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Apoa4P06728 395 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Etv4P28322 485 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Pcsk4P29121 655 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Slc6a13P31649 602 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Fen1P39749 378 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Impdh1P50096 514 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Atp6v1b2P62814 511 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 ArvcfP98203 962 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Col28a1Q2UY11 1141 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ccdc127Q3TC33 260 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Rsrp1Q3UC65 298 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Mthfd1lQ3V3R1 977 aaKnown RBP7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Slc22a15Q504N2 544 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Gpr19Q61121 415 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Pcbp2Q61990 362 aaKnown RBP7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Klhl14Q69ZK5 630 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Zc3h11aQ6NZF1 792 aaKnown RBP7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Scd4Q6T707 353 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Rad9bQ6WBX7 403 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Nemp1Q6ZQE4 437 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Fam107aQ78TU8 144 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Dnajc15Q78YY6 149 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ldoc1Q7TPY9 151 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Arhgap11aQ80Y19 987 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 GnsQ8BFR4 544 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Sema3dQ8BH34 777 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Rnf144bQ8BKD6 301 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 DseQ8BLI4 958 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ccdc184Q8BMK5 191 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Abraxas1Q8BPZ8 407 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Nup54Q8BTS4 510 aaKnown RBP7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ldhal6bQ8BVP2 382 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Galnt5Q8C102 930 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Ephb1Q8CBF3 984 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Hacd3Q8K2C9 362 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Tmem30aQ8VEK0 364 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Olfr695Q8VFM3 315 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 HnmtQ91VF2 295 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Frs3Q91WJ0 492 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Pcdhb18Q91Y02 792 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 B4galt3Q91YY2 395 aa7.03□□□□□ -1.28
Ccdc47-202ENSMUST00000106865 Tcf7l2Q924A0 459 aa7.03□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms