RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Hcn1O88704 910 aa22.77■■□□□ 1.24
Sh3rf1-201ENSMUST00000034060 Q8BHN7 327 aa22.77■■□□□ 1.24
Sh3rf1-201ENSMUST00000034060 Ces2eQ8BK48 559 aa22.77■■□□□ 1.24
Sh3rf1-201ENSMUST00000034060 Olfr570Q8VH12 312 aa22.77■■□□□ 1.24
Sh3rf1-201ENSMUST00000034060 Klk6Q91Y82 253 aa22.77■■□□□ 1.24
Sh3rf1-201ENSMUST00000034060 Mzb1Q9D8I1 188 aa22.77■■□□□ 1.24
Sh3rf1-201ENSMUST00000034060 Vmn2r93L7N1Z9 857 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 PepdQ11136 493 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Pyroxd2Q3U4I7 581 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Spin1Q61142 262 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Itm2aQ61500 263 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Sh3bp4Q921I6 962 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 4933436I01RikQ9D3T1 429 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 HephQ9Z0Z4 1157 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 9630041A04RikD3Z3U4 205 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Slc22a1O08966 556 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Slc22a2O70577 553 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Cyp2f2P33267 491 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Sox2P48432 319 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Sf1Q64213 653 aaKnown RBP22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Znf592Q8BHZ4 1262 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Glt28d2Q8BML3 165 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Isoc1Q91V64 297 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Mrgpra1Q91WW5 304 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Slc25a19Q9DAM5 318 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Maged1Q9QYH6 775 aaKnown RBP22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Serpina7P61939 418 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Polr1dP97304 133 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Tspan18Q80WR1 248 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Nipal4Q8BZF2 406 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Q91Z58 1206 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Diras1Q91Z61 198 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Yipf2Q99LP8 312 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Kiaa0141Q9DCV6 510 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Psmd13Q9WVJ2 376 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Nup153E9Q3G8 1462 aaKnown RBP22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Gadd45aP48316 165 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Apba2P98084 750 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Klf8Q8BLM0 355 aaKnown RBP22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Rnf146Q9CZW6 359 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Pnp2Q9D8C9 305 aa22.76■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Spin2gA0A0N4SW15 236 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Spin2eJ3QNQ0 234 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Elovl3O35949 271 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Gna12P27600 379 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Fgf1P61148 155 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Cbx5Q61686 191 aaKnown RBP22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Mgat5bQ765H6 792 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Adgrg2Q8CJ12 1009 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Nrip2Q9JHR9 270 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Chrna6Q9R0W9 494 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Zar1lC3VD30 291 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Hdac2P70288 488 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Gm29609Q3UU56 907 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Fbxw11Q5SRY7 542 aaKnown RBP22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 AftphQ80WT5 931 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Gtf3c2Q8BL74 907 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Pcdhb4Q91XZ6 784 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Serpinb7Q9D695 380 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Oaz1P54369 227 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Polr3bP59470 1133 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Pdcd1Q02242 288 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Cpne7Q0VE82 557 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Smu1Q3UKJ7 513 aaKnown RBP22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Ntan1Q64311 310 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Lemd2Q6DVA0 511 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Slc15a5Q8CBB2 566 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Adgrf1Q8VEC3 908 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Glod4Q9CPV4 298 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 PigkQ9CXY9 395 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Tspan4Q9DCK3 238 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Sult3a2G5E904 293 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Ifnar2O35664 513 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Pgk1P09411 417 aaKnown RBP22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Ap1s1P61967 158 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Cdkn2cQ60772 168 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Ttf1Q62187 859 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Atp13a2Q9CTG6 1169 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Alg13Q9D8C3 1166 aaKnown RBP22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Ptges3lQ9D9A7 131 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Jam2Q9JI59 298 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Gm6502L7N456 481 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Fkbp8O35465 402 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Yap1P46938 488 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 OstnP61364 130 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Zdhhc11Q14AK4 347 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Grhl2Q8K5C0 625 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Mrps2Q924T2 291 aaKnown RBP22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Ufsp2Q99K23 461 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Upk1bQ9Z2C6 260 aa22.75■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Adamts6D3Z1A5 1117 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Q3KQP7 184 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Insig1Q8BGI3 259 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Pomt2Q8BGQ4 820 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Olfml2aQ8BHP7 681 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 AcmsdQ8R519 336 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Cngb3Q9JJZ9 694 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Resp18P47939 175 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 MslnQ61468 625 aa22.74■■□□□ 1.23
Sh3rf1-201ENSMUST00000034060 Camk1Q91YS8 374 aa22.74■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.7 ms