RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Hepacam2Q4VAH7 463 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Arhgef15Q5FWH6 849 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Taar8aQ5QD07 344 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Fam71bQ5STT6 665 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Otud6aQ6IE21 290 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Lix1Q6P566 282 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rhox11Q810N8 206 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Prr11Q8BHE0 368 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Casp9Q8C3Q9 454 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Kctd2Q8CEZ0 266 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Tp53bp2Q8CG79 1128 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 ThtpaQ8JZL3 224 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Oas1hQ8VI97 369 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rsph1Q8VIG3 301 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Tspan1Q99J59 240 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Q9CXL3 195 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Aldh7a1Q9DBF1 539 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 EefsecQ9JHW4 583 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 RgrQ9Z2B3 291 aa12.44□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn2r111K7N674 857 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm6502L7N456 481 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Elovl3O35949 271 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Fzd1O70421 642 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 CremP27699 357 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Htr5bP31387 370 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Slc16a1P53986 493 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Entpd1P55772 510 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Nanos3P60324 178 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Eef1a2P62631 463 aaKnown RBP12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Hoxd13P70217 339 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gpr149Q3UVY1 732 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Krtcap2Q5RL79 136 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Tmem184bQ8BG09 407 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Neu4Q8BZL1 478 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gykl1Q8C635 549 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Fam155aQ8CCS2 467 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 ClyblQ8R4N0 338 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Kctd5Q8VC57 234 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Pex19Q8VCI5 299 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Pramel1Q99MW3 458 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Trim12aQ99PQ1 284 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Wdr73Q9CWR1 371 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Abt1Q9QYL7 269 aaKnown RBP12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 CtszQ9WUU7 306 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm42715A0A087WP63 3095 aaKnown RBP12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn2r-ps130A0A140T8U3 855 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Tmem236A2ARJ3 344 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Mgat4eA6H684 439 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 4930455H04RikD3Z622 58 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ddx43D3Z6P9 646 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Gm16494E9Q2Z4 87 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 MaxP28574 160 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 VegfbP49766 207 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Nudt1P53368 156 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cxcr5Q04683 374 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cmpk2Q3U5Q7 447 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cyp2j13Q3UNV4 503 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 NkaplQ5SZT7 395 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Usp7Q6A4J8 1103 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Sdr16c5Q7TQA3 309 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Q8BHR8 331 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 C1rbQ8CFG9 706 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vps50Q8CI71 964 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Lurap1lQ8K2P1 221 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn1r185Q8R299 319 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn1r33Q8R2E0 305 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Pcolce2Q8R4W6 414 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Olfr854Q8VFF1 315 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ptov1Q91VU8 416 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Elmod3Q91YP6 381 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 PrkxQ922R0 355 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 MlycdQ99J39 492 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Spg21Q9CQC8 308 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Cst9Q9Z0H6 137 aa12.43□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Eml5Q8BQM8 1977 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Spin2gA0A0N4SW15 236 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Prrg1A2BFE8 218 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Fam71f2B2RXB0 297 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Vmn1r238E9Q373 306 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Spin2eJ3QNQ0 234 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 TfamP40630 243 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Ccr7P47774 378 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 AhcyP50247 432 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 MybphP70402 483 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 BmxP97504 651 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 DtlQ3TLR7 729 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Q3UK37 420 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Hs3st2Q673U1 367 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Slc25a23Q6GQS1 467 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Q6PAC4 1279 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Casd1Q7TN73 797 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Amigo1Q80ZD8 492 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Elp2Q91WG4 831 aaKnown RBP12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Pcdhga9Q91XX9 932 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Slc35a5Q921R7 437 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Nmd3Q99L48 503 aaKnown RBP12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Hnrnpa0Q9CX86 305 aaKnown RBP12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Rhox6O70238 227 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Tpst1O70281 370 aa12.42□□□□□ -0.42
Rnf4-201ENSMUST00000030992 Btnl2O70355 454 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms