RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 PepdQ11136 493 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Gm648Q3UJ22 213 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Gpr149Q3UVY1 732 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Cep78Q6IRU7 790 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Fndc3bQ6NWW9 1207 aaKnown RBP16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Olfr1288Q7TQY0 312 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Pgs1Q8BHF7 553 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Hmbox1Q8BJA3 419 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Kdelr3Q8R1L4 214 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 AclyQ91V92 1091 aaKnown RBP16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 AassQ99K67 926 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Eif2b2Q99LD9 351 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Snx2Q9CWK8 519 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Zswim1Q9CWV7 455 aaKnown RBP16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Chmp2aQ9DB34 222 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Ropn1lQ9EQ00 218 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Tsga8Q9JJL0 238 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Acbd4E9Q289 327 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Xkr6E9Q6C8 638 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 C9P06683 548 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Tap2P36371 702 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Lhx3P50481 400 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Scn1bP97952 218 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Nt5c3bQ3UFY7 300 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Lemd2Q6DVA0 511 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 BC061212Q6P8K3 481 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Cdc14bQ6PFY9 485 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 ErfeQ6PGN1 340 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Cxcl3Q6W5C0 100 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Spata21Q8BHW6 681 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Il17rdQ8JZL1 738 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Vmn1r219Q8R271 312 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Oit3Q8R4V5 546 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Pbdc1Q9D0B6 198 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 Actl7aQ9QY84 440 aa16.52■□□□□ 0.24
Ctcf-201ENSMUST00000005841 PikfyveQ9Z1T6 2097 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 LexmA2AVQ5 414 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm4450E9Q007 373 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Vmn2r67K7N6T2 851 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Asna1O54984 348 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 TnfP06804 235 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Copz1P61924 177 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 ArvcfP98203 962 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Hsd3b4Q61767 373 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Rbm38Q62176 237 aaKnown RBP16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 DarsQ922B2 501 aaKnown RBP16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ppp2r2dQ925E7 453 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Q9CPZ3 230 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Dsn1Q9CYC5 348 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ndel1Q9ERR1 345 aa16.52■□□□□ 0.23
Ctcf-201ENSMUST00000005841 AU018091E9PWS4 684 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gfra2O08842 464 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Klrk1O54709 232 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gdf9Q07105 441 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Macrod2Q3UYG8 475 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 MagixQ4KL35 324 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Dcaf13Q6PAC3 445 aaKnown RBP16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Tmem125Q8CHQ6 216 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Elp2Q91WG4 831 aaKnown RBP16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Arrb2Q91YI4 410 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ska1Q9CPV1 254 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ddx28Q9CWT6 540 aaKnown RBP16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 GhrlQ9EQX0 117 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Plekhb1Q9QYE9 243 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Rnf217D3YYI7 515 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm5415E9PXF3 478 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zfp882E9Q4R4 555 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 H2-K1P01901 369 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Limk1P53668 647 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cdh6P97326 790 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Adra1bP97717 514 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zp1Q62005 623 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zfp184Q7TSH9 737 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Fam160b1Q8CDM8 764 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Pnpla8Q8K1N1 776 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 BgnP28653 369 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Htr5bP31387 370 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Slc6a11P31650 627 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Hmgcs2P54869 508 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Abraxas2Q3TCJ1 415 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Caprin1Q60865 707 aaKnown RBP16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Sec24dQ6NXL1 1032 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Retreg1dQ8VE91 480 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Setd7Q8VHL1 366 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Cbr4Q91VT4 236 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Fig4Q91WF7 907 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 B3galt4Q9Z0F0 371 aa16.51■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm37596A0A0A6YXL2 336 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm16432A0A0A6YXX9 775 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Zfp985A2A7A5 519 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 DdostO54734 441 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ccdc106Q3ULM0 279 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Ppm1hQ3UYC0 513 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Bdh2Q8JZV9 245 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Olfr450Q8VF81 310 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Adgre4Q91ZE5 689 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gm3604A0A087WPN2 559 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Gucy2dA0A0U1RPR8 1117 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 Faap100A2ACJ2 879 aa16.5■□□□□ 0.23
Ctcf-201ENSMUST00000005841 TagapB2RWW0 714 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms