RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SFSWAPQ12872 951 aaKnown RBP17.14■□□□□ 0.33
PHGDH-232ENST00000641947 GCNT7Q6ZNI0 430 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 LARP4Q71RC2 724 aaKnown RBP eCLIP17.14■□□□□ 0.332e-6■□□□□ 11.3
PHGDH-232ENST00000641947 ASRGL1Q7L266 308 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 ACTRT2Q8TDY3 377 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 FBXL8Q96CD0 374 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 BMFQ96LC9 184 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 DPEP2Q9H4A9 486 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 SGK2Q9HBY8 427 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 FGF22Q9HCT0 170 aa17.14■□□□□ 0.33
PHGDH-232ENST00000641947 STOX2Q9P2F5 926 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-232ENST00000641947 LRRC72A6NJI9 287 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 KMOO15229 486 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 CATP04040 527 aaKnown RBP17.13■□□□□ 0.33
PHGDH-232ENST00000641947 ENO1P06733 434 aaKnown RBP17.13■□□□□ 0.33
PHGDH-232ENST00000641947 UROSP10746 265 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 HNMTP50135 292 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 PFN3P60673 137 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 METTL21CQ5VZV1 264 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 METTL2BQ6P1Q9 378 aaKnown RBP17.13■□□□□ 0.33
PHGDH-232ENST00000641947 SCIMPQ6UWF3 145 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 TCAIMQ8N3R3 496 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 KIF2BQ8N4N8 673 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 LMNTD1Q8N9Z9 388 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 SLC32A1Q9H598 525 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 TXLNGQ9NUQ3 528 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 PNMA8BQ9ULN7 279 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-232ENST00000641947 SUFUQ9UMX1 484 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 PSMD13Q9UNM6 376 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 PLXND1Q9Y4D7 1925 aa17.13■□□□□ 0.33
PHGDH-232ENST00000641947 PRR19A6NJB7 356 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 GPR89AB7ZAQ6 455 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 SCAMP1O15126 338 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 PRAMEF4O60810 478 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 FSBPO95073 299 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 SLC16A8O95907 504 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 CAPN1P07384 714 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 LINC00032P0C843 101 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 GPR89BP0CG08 455 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 ACP5P13686 325 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 AOC1P19801 751 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 ITPKAP23677 461 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 IMPA1P29218 277 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 CPA2P48052 419 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 CCNG1P51959 295 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 PRAMEF9Q5VWM5 478 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 METRNLQ641Q3 311 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 CHST15Q7LFX5 561 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 LRRC70Q7Z2Q7 622 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 PDZD3Q86UT5 571 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 KIRREL3Q8IZU9 778 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 FAM160A2Q8N612 972 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 PPFIBP2Q8ND30 876 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 DENND6BQ8NEG7 585 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 TSTD1Q8NFU3 115 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 OR2T11Q8NH01 316 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 FBXO27Q8NI29 283 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 TOE1Q96GM8 510 aaKnown RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 NSL1Q96IY1 281 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 NUSAP1Q9BXS6 441 aaKnown RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 TPSD1Q9BZJ3 242 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 CAAP1Q9H8G2 361 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 CRCPO75575 148 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 DNAJC8O75937 253 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 WDR47O94967 919 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 OTCP00480 354 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 EPB42P16452 691 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 HNRNPA2B1P22626 353 aaKnown RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 MAP4P27816 1152 aaKnown RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 PYCR3Q53H96 274 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 XKR7Q5GH72 579 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 CHSY3Q70JA7 882 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 DDIASQ8IXT1 998 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 FBXO15Q8NCQ5 510 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 CEP70Q8NHQ1 597 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 HMGCLL1Q8TB92 370 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 RLN3Q8WXF3 142 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 SCARF2Q96GP6 870 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 FOPNLQ96NB1 174 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 UHRF1Q96T88 793 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 NRTNQ99748 197 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 AKTIPQ9H8T0 292 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 POLG2Q9UHN1 485 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 SLC22A14Q9Y267 594 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 MRPS17Q9Y2R5 130 aaKnown RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 RNF11Q9Y3C5 154 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 ANGPTL3Q9Y5C1 460 aa17.12■□□□□ 0.33
PHGDH-232ENST00000641947 COPG1Q9Y678 874 aaKnown RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 DNMT3AQ9Y6K1 912 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-232ENST00000641947 LAMA1P25391 3075 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 MYO1CO00159 1063 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 CACNB4O00305 520 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-232ENST00000641947 ALDOCP09972 364 aaKnown RBP17.11■□□□□ 0.33
PHGDH-232ENST00000641947 RPL10P27635 214 aaKnown RBP17.11■□□□□ 0.33
PHGDH-232ENST00000641947 ARL1P40616 181 aaPredicted RBP17.11■□□□□ 0.33
PHGDH-232ENST00000641947 PIK3CGP48736 1102 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 KIAA1024LP59773 190 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 KLF10Q13118 480 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 RPA4Q13156 261 aa17.11■□□□□ 0.33
PHGDH-232ENST00000641947 GRB7Q14451 532 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms