RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 FZD4Q9ULV1 537 aa8.66□□□□□ -1.02
PHGDH-219ENST00000641513 ZFR2Q9UPR6 939 aaKnown RBP8.66□□□□□ -1.02
PHGDH-219ENST00000641513 PRKAB1Q9Y478 270 aa8.66□□□□□ -1.02
PHGDH-219ENST00000641513 OR1A2Q9Y585 309 aa8.66□□□□□ -1.02
PHGDH-219ENST00000641513 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.66□□□□□ -1.02
PHGDH-219ENST00000641513 TP53BP1Q12888 1972 aaPredicted RBP8.66□□□□□ -1.02
PHGDH-219ENST00000641513 H3BM21 787 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 STK25O00506 426 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 PPP6CO00743 305 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 UBFD1O14562 309 aaKnown RBP8.65□□□□□ -1.02
PHGDH-219ENST00000641513 SLC16A5O15375 505 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 SLC31A1O15431 190 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 GPC4O75487 556 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 POP7O75817 140 aaKnown RBP8.65□□□□□ -1.02
PHGDH-219ENST00000641513 CHEK2O96017 543 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 CATP04040 527 aaKnown RBP8.65□□□□□ -1.02
PHGDH-219ENST00000641513 ENO2P09104 434 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-219ENST00000641513 GABRG2P18507 467 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 PIK3R1P27986 724 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 EPHA3P29320 983 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 CPA2P48052 419 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 SH3BP2P78314 561 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 SP140Q13342 867 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 GTF2H2Q13888 395 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 CCINQ13939 588 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 FGL2Q14314 439 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 LRRC32Q14392 662 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 UBXN2BQ14CS0 331 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 PPP1R3AQ16821 1122 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 SPATS1Q496A3 300 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 GTF2H2CQ6P1K8 395 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 HACD2Q6Y1H2 254 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 Q6ZS52 159 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 GPRIN3Q6ZVF9 776 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 NEK10Q6ZWH5 1172 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 USP30Q70CQ3 517 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 CHSY3Q70JA7 882 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 GOLGA7Q7Z5G4 137 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 LRRTM4Q86VH4 590 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 HOMEZQ8IX15 550 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 CLYBLQ8N0X4 340 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 TCAIMQ8N3R3 496 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 LILRA3Q8N6C8 439 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-219ENST00000641513 SNX31Q8N9S9 440 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 KYQ8NBH2 561 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 TP53I13Q8NBR0 393 aaPredicted RBP8.65□□□□□ -1.02
PHGDH-219ENST00000641513 GATA6Q92908 595 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 GLMNQ92990 594 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 COX14Q96I36 57 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 TRAPPC9Q96Q05 1148 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 OR52B2Q96RD2 323 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 KCNA7Q96RP8 456 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 ECSITQ9BQ95 431 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 NOL11Q9H8H0 719 aaKnown RBP8.65□□□□□ -1.02
PHGDH-219ENST00000641513 LMAN1LQ9HAT1 526 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 RDH14Q9HBH5 336 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 ZBTB26Q9HCK0 441 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 PREBQ9HCU5 417 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 TNFRSF12AQ9NP84 129 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 ZNHIT2Q9UHR6 403 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 SCOCQ9UIL1 159 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 PTBP2Q9UKA9 531 aaKnown RBP8.65□□□□□ -1.02
PHGDH-219ENST00000641513 DUSP12Q9UNI6 340 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 PDE10AQ9Y233 779 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 POMPQ9Y244 141 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 COL6A3P12111 3177 aa8.65□□□□□ -1.02
PHGDH-219ENST00000641513 LRP4O75096 1905 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 SLC5A10A0PJK1 596 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 LRRC72A6NJI9 287 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 LOC730098B7Z3J9 87 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 K7EPI3 171 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 E2F3O00716 465 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 SDHDO14521 159 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 TAPBPO15533 448 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 DCXO43602 365 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 KATNA1O75449 491 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 SLCO2B1O94956 709 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 WDR47O94967 919 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 OR4F21O95013 312 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CAPNS1P04632 268 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 JUNP05412 331 aaKnown RBP8.64□□□□□ -1.03
PHGDH-219ENST00000641513 GSTM1P09488 218 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 HMOX2P30519 316 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 BDKRB1P46663 353 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 MRPL19P49406 292 aaKnown RBP8.64□□□□□ -1.03
PHGDH-219ENST00000641513 TPMTP51580 245 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 PKNOX1P55347 436 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 PPP2CBP62714 309 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 PPP2CAP67775 309 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 GSTM4Q03013 218 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 TBL3Q12788 808 aaKnown RBP8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CDC16Q13042 620 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CUL3Q13618 768 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 CCNIQ14094 377 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 GBX1Q14549 363 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 PCBP2Q15366 365 aaKnown RBP eCLIP8.64□□□□□ -1.03
PHGDH-219ENST00000641513 LSM12Q3MHD2 195 aaKnown RBP8.64□□□□□ -1.03
PHGDH-219ENST00000641513 TMEM31Q5JXX7 168 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 FAM219BQ5XKK7 198 aa8.64□□□□□ -1.03
PHGDH-219ENST00000641513 BNC2Q6ZN30 1099 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms