RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 GRAP2O75791 330 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 HMGN1P05114 100 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PRKCBP05771 671 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 GOT1P17174 413 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SAT1P21673 171 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 ALAS2P22557 587 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 IGFBP5P24593 272 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 WEE1P30291 646 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 NOS2P35228 1153 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 CDH8P55286 799 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TAS2R39P59534 338 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 GRB7Q14451 532 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 AANATQ16613 207 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SYT16Q17RD7 645 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 FAM214AQ32MH5 1076 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TIMM50Q3ZCQ8 353 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SEZ6Q53EL9 994 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PCID2Q5JVF3 399 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 DACT2Q5SW24 774 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SLC35F1Q5T1Q4 408 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 STRIP1Q5VSL9 837 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 RAP1GAP2Q684P5 730 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 JADE1Q6IE81 842 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TYW3Q6IPR3 259 aaKnown RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 C19orf48Q6RUI8 117 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 HS3ST5Q8IZT8 346 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 C2CD4AQ8NCU7 369 aaPredicted RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TWIST2Q8WVJ9 160 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SLC47A1Q96FL8 570 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 ZC3HAV1LQ96H79 300 aaKnown RBP11.78□□□□□ -0.52
CAPN3-221ENST00000638141 TRIM8Q9BZR9 551 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 OR51B5Q9H339 312 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 PRDM12Q9H4Q4 367 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 ACTR8Q9H981 624 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 SMURF1Q9HCE7 757 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 ZIM2Q9NZV7 527 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 GMEB2Q9UKD1 530 aa11.78□□□□□ -0.52
CAPN3-221ENST00000638141 A0A1B0GVM2 712 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 ARNTLO00327 626 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 IFRD1O00458 451 aaPredicted RBP11.77□□□□□ -0.52
CAPN3-221ENST00000638141 GNGT2O14610 69 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 PROM1O43490 865 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 VPS26AO75436 327 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 NMBRP28336 390 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 KRT20P35900 424 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 CLCN5P51795 746 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 RBP5P82980 135 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.77□□□□□ -0.52
CAPN3-221ENST00000638141 NFE2L1Q14494 772 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 MXD4Q14582 209 aaPredicted RBP11.77□□□□□ -0.52
CAPN3-221ENST00000638141 GOLGA7BQ2TAP0 167 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 HKDC1Q2TB90 917 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 CLLU1Q5K131 121 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 CERCAMQ5T4B2 595 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 PKN3Q6P5Z2 889 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 MPZL3Q6UWV2 235 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 KIAA1324Q6UXG2 1013 aaKnown RBP11.77□□□□□ -0.52
CAPN3-221ENST00000638141 RASGRP3Q8IV61 690 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 C9orf62Q8N4C0 152 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 CARNMT1Q8N4J0 409 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 GDPD1Q8N9F7 314 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 OR8J3Q8NGG0 315 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 RHBDF1Q96CC6 855 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 MCCC1Q96RQ3 725 aaPredicted RBP11.77□□□□□ -0.52
CAPN3-221ENST00000638141 CARS2Q9HA77 564 aaKnown RBP11.77□□□□□ -0.52
CAPN3-221ENST00000638141 CYP4F12Q9HCS2 524 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 PKP3Q9Y446 797 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 HSPB11Q9Y547 144 aa11.77□□□□□ -0.52
CAPN3-221ENST00000638141 MAFBQ9Y5Q3 323 aaPredicted RBP11.77□□□□□ -0.52
CAPN3-221ENST00000638141 LINC00854A0A1B0GVQ3 168 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 A0A1W2PRG6 482 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 FAM234BA2RU67 622 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 NT5C1B-RDH14C9J2C7 533 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 AZIN1O14977 448 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 FZD6O60353 706 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF250P15622 560 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 PAMP19021 973 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 GBX2P52951 348 aaPredicted RBP11.77□□□□□ -0.53
CAPN3-221ENST00000638141 MAB21L1Q13394 359 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 ZNF460Q14592 562 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 QPRTQ15274 297 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 TAB1Q15750 504 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 NKG7Q16617 165 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 FUT11Q495W5 492 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 TEX261Q6UWH6 196 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 LIMS2Q7Z4I7 341 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 IFNL1Q8IU54 200 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 ZBTB8OSQ8IWT0 167 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 CHPFQ8IZ52 775 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 KCT2Q8NC54 265 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 CCNYQ8ND76 341 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 PPP1R2P1Q96PQ5 205 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 NT5C1AQ9BXI3 368 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 MMP28Q9H239 520 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 CCSER2Q9H7U1 834 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 IL1RAPQ9NPH3 570 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 INTS7Q9NVH2 962 aaKnown RBP11.77□□□□□ -0.53
CAPN3-221ENST00000638141 GLS2Q9UI32 602 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 GMPPBQ9Y5P6 360 aa11.77□□□□□ -0.53
CAPN3-221ENST00000638141 U3KQ87 197 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms