RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SLC22A15Q8IZD6 547 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 ADGRF3Q8IZF5 1079 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 LKAAEAR1Q8TD35 194 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 SKA2Q8WVK7 121 aaPredicted RBP13.38□□□□□ -0.27
PNKP-228ENST00000637325 STARD8Q92502 1023 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 CPT1BQ92523 772 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 CATSPER2Q96P56 530 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 NRTNQ99748 197 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 SEMA4CQ9C0C4 833 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 XAB2Q9HCS7 855 aaKnown RBP13.38□□□□□ -0.27
PNKP-228ENST00000637325 KCND3Q9UK17 655 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 PLAGL1Q9UM63 463 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 PCDHB3Q9Y5E6 796 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 HEATR5BQ9P2D3 2071 aa13.38□□□□□ -0.27
PNKP-228ENST00000637325 MAGEB16A2A368 324 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 ISM1B1AKI9 464 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 TMEM150CB9EJG8 249 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 ZNF185O15231 689 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 CPNE3O75131 537 aaKnown RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 GPC4O75487 556 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 FAM87AP0C7U9 286 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 SFTPCP11686 197 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 MLNP12872 115 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 ST6GAL1P15907 406 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 TCP1P17987 556 aaKnown RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 RPS3P23396 243 aaKnown RBP eCLIP13.37□□□□□ -0.27
PNKP-228ENST00000637325 AOAHP28039 575 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 FMO4P31512 558 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 CCR10P46092 362 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 DHX34Q14147 1143 aaKnown RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 KIAA0930Q6ICG6 404 aaPredicted RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 TTC23LQ6PF05 361 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 OTOAQ7RTW8 1153 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 CAND1Q86VP6 1230 aaKnown RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 EXD3Q8N9H8 876 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 MCUQ8NE86 351 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 N4BP2L2Q92802 583 aaPredicted RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 ZNF669Q96BR6 464 aaPredicted RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 ZNF501Q96CX3 271 aaPredicted RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 TCF12Q99081 682 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 SLC7A5P2Q9GIP4 190 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 KLHL25Q9H0H3 589 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 P2RY12Q9H244 342 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 SYTL2Q9HCH5 934 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 LHX9Q9NQ69 397 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 OR6C2Q9NZP2 312 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 SERTAD3Q9UJW9 196 aa13.37□□□□□ -0.27
PNKP-228ENST00000637325 MRPS18BQ9Y676 258 aaKnown RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 TLN1Q9Y490 2541 aaKnown RBP13.37□□□□□ -0.27
PNKP-228ENST00000637325 FER1L5A0AVI2 2057 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 H3BMM5 538 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 TMEM63AO94886 807 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 KLK3P07288 261 aaPredicted RBP13.36□□□□□ -0.27
PNKP-228ENST00000637325 CHRM5P08912 532 aaPredicted RBP13.36□□□□□ -0.27
PNKP-228ENST00000637325 PVRP15151 417 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 UGT2B7P16662 529 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 ARNTP27540 789 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 GNG11P61952 73 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 CDC20Q12834 499 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 DNASE1L3Q13609 305 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 THOC5Q13769 683 aaKnown RBP13.36□□□□□ -0.27
PNKP-228ENST00000637325 DEFB109BQ30KR1 87 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 NEPROQ6NW34 567 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 UNC5DQ6UXZ4 953 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 ZNF605Q86T29 641 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 VRK3Q8IV63 474 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 MR1Q95460 341 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 FOPNLQ96NB1 174 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 SERPINB12Q96P63 405 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 TRAPPC9Q96Q05 1148 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 PITPNM3Q9BZ71 974 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 LATS2Q9NRM7 1088 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 ASIC3Q9UHC3 531 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 SLC39A10Q9ULF5 831 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 VPS9D1Q9Y2B5 631 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 NEU2Q9Y3R4 380 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 MAD1L1Q9Y6D9 718 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 MED13Q9UHV7 2174 aa13.36□□□□□ -0.27
PNKP-228ENST00000637325 MDC1Q14676 2089 aaKnown RBP13.35□□□□□ -0.27
PNKP-228ENST00000637325 FAM237BA0A1B0GVD1 139 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 CTAGE9A4FU28 777 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 C21orf140B9A014 251 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 SLCO2B1O94956 709 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 CHRM3P20309 590 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 OGNP20774 298 aaKnown RBP13.35□□□□□ -0.27
PNKP-228ENST00000637325 CYP2A7P20853 494 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 F8A1P23610 371 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 RAB28P51157 221 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 RPS15P62841 145 aaKnown RBP13.35□□□□□ -0.27
PNKP-228ENST00000637325 ERV3-1Q14264 604 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 KIR2DS3Q14952 304 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 TYSND1Q2T9J0 566 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 ANKRD20A4Q4UJ75 823 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 PLEKHS1Q5SXH7 462 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 TRIM73Q86UV7 250 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 DCUN1D3Q8IWE4 304 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 PPIL6Q8IXY8 311 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 RAB42Q8N4Z0 105 aa13.35□□□□□ -0.27
PNKP-228ENST00000637325 C19orf47Q8N9M1 422 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms