RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 AP3B1O00203 1094 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 HCRTR1O43613 425 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 CPNE3O75131 537 aaKnown RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 KATNA1O75449 491 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 APOA4P06727 396 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 CHRM5P08912 532 aaPredicted RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 CCNYL3P0C7X3 344 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 UGT2B7P16662 529 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 TCN2P20062 427 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 PEBP1P30086 187 aaKnown RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 SHMT2P34897 504 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 PPARGP37231 505 aaPredicted RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 EIF3BP55884 814 aaKnown RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 RPS18P62269 152 aaKnown RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 PLOD1Q02809 727 aaPredicted RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 GPS2Q13227 327 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 DNASE1L3Q13609 305 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 ERV3-1Q14264 604 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 ZIC1Q15915 447 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 DEFB109BQ30KR1 87 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 ZNF789Q5FWF6 425 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 CTSL3PQ5NE16 218 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 TMTC4Q5T4D3 741 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 PTRHD1Q6GMV3 140 aaKnown RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 LCN10Q6JVE6 187 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 CCDC137Q6PK04 289 aaKnown RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 CDHR3Q6ZTQ4 885 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 BPHLQ86WA6 291 aaPredicted RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 FAM20CQ8IXL6 584 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 AGGF1Q8N302 714 aaeCLIP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 OTUD6BQ8N6M0 293 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 OR1L3Q8NH93 324 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 CFAP61Q8NHU2 1237 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 BIRC8Q96P09 236 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 FCRL4Q96PJ5 515 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 CARD6Q9BX69 1037 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 MRM3Q9HC36 420 aaKnown RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 FAM60AQ9NP50 221 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 KCND1Q9NSA2 647 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 STARD5Q9NSY2 213 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 POLG2Q9UHN1 485 aa10.15□□□□□ -0.78
TMCO1-209ENST00000628579 RUVBL2Q9Y230 463 aaKnown RBP10.15□□□□□ -0.78
TMCO1-209ENST00000628579 SNRNP200O75643 2136 aaKnown RBP10.15□□□□□ -0.79
TMCO1-209ENST00000628579 KRT87PA6NCN2 255 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 F8W8V4 182 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 ZSCAN12O43309 604 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 NDUFS3O75489 264 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 SLCO2B1O94956 709 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 MT-ND3P03897 115 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 CTSBP07858 339 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 PKLRP30613 574 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 CCR10P46092 362 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 GRB7Q14451 532 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 TYSND1Q2T9J0 566 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 DEFB110Q30KQ9 67 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 DNAJC21Q5F1R6 531 aaKnown RBP10.14□□□□□ -0.79
TMCO1-209ENST00000628579 KIAA0930Q6ICG6 404 aaPredicted RBP10.14□□□□□ -0.79
TMCO1-209ENST00000628579 CASC4Q6P4E1 433 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 SPNS2Q8IVW8 549 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 C2orf73Q8N5S3 287 aaPredicted RBP10.14□□□□□ -0.79
TMCO1-209ENST00000628579 C19orf47Q8N9M1 422 aaKnown RBP10.14□□□□□ -0.79
TMCO1-209ENST00000628579 LINC01555Q8NAE3 123 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 OR8K5Q8NH50 307 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 ACTRT1Q8TDG2 376 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 ASZ1Q8WWH4 475 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 LPGAT1Q92604 370 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 FAM136AQ96C01 138 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 CATSPER2Q96P56 530 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 SERPINB12Q96P63 405 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 IL17FQ96PD4 163 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 NAP1L3Q99457 506 aaPredicted RBP10.14□□□□□ -0.79
TMCO1-209ENST00000628579 MENTQ9BUN1 341 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 TSSK1BQ9BXA7 367 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 TWSG1Q9GZX9 223 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 ACTL8Q9H568 366 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 FANCEQ9HB96 536 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 LATS2Q9NRM7 1088 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 GEMIN8Q9NWZ8 242 aaKnown RBP10.14□□□□□ -0.79
TMCO1-209ENST00000628579 OR6C2Q9NZP2 312 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 GNPTGQ9UJJ9 305 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 TSR3Q9UJK0 312 aaKnown RBP10.14□□□□□ -0.79
TMCO1-209ENST00000628579 SNX12Q9UMY4 172 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 KLHL20Q9Y2M5 609 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 PCDHGA6Q9Y5G7 932 aa10.14□□□□□ -0.79
TMCO1-209ENST00000628579 SPTA1P02549 2419 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 TENM4Q6N022 2769 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 SPENQ96T58 3664 aaKnown RBP10.13□□□□□ -0.79
TMCO1-209ENST00000628579 CDC14CA4D256 554 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 C21orf140B9A014 251 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 KIF5CO60282 957 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 PHF2O75151 1096 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 NIPSNAP2O75323 286 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 CREG1O75629 220 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 MSL3P1P0C860 447 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 CYP2A7P20853 494 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 RPS3P23396 243 aaKnown RBP eCLIP10.13□□□□□ -0.793e-9■■■■■ 32.9
TMCO1-209ENST00000628579 FMO4P31512 558 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 RORAP35398 523 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 MAGEA3P43357 314 aa10.13□□□□□ -0.79
TMCO1-209ENST00000628579 BDKRB1P46663 353 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms