RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ACOT8O14734 319 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 AZIN1O14977 448 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 VILLO15195 856 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 SIX3O95343 332 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 GALTP07902 379 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PRR23D2P0DMB1 279 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TYRP14679 529 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PTNP21246 168 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 KELP23276 732 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 HPCAL1P37235 193 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 KLHL12Q53G59 568 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PM20D1Q6GTS8 502 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 DENND5AQ6IQ26 1287 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ARMC8Q8IUR7 673 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ARHGAP12Q8IWW6 846 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 Q8N9G6 341 aaPredicted RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF461Q8TAF7 563 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 DTNBP1Q96EV8 351 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 RNFT2Q96EX2 444 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 ART5Q96L15 291 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 MRGPRX2Q96LB1 330 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PRRG4Q9BZD6 226 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TRIM8Q9BZR9 551 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 LIN28AQ9H9Z2 209 aaKnown RBP8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 TMLHEQ9NVH6 421 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 COMMD8Q9NX08 183 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 PTTG2Q9NZH5 202 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 COQ6Q9Y2Z9 468 aa8.13□□□□□ -1.11
PTPDC1-204ENST00000620992 A0A0G2JMZ2 1700 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 LRRC37A2A6NM11 1700 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 PLXNA1Q9UIW2 1896 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 A0A0U1RQS6 177 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 H3BMM5 538 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 MAN1A2O60476 641 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 STK16O75716 305 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 IFNA14P01570 189 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 NR1H2P55055 460 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CDH15P55291 814 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 YBEYP58557 167 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ECT2LQ008S8 904 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 MTA1Q13330 715 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNHIT3Q15649 155 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 AGMOQ6ZNB7 445 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 Q6ZVL8 140 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ATL1Q8WXF7 558 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 MYLIPQ8WY64 445 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CLP1Q92989 425 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 YIPF4Q9BSR8 244 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 IGSF5Q9NSI5 407 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 EIF2B4Q9UI10 523 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF490Q9ULM2 529 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF232Q9UNY5 417 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 KLHL20Q9Y2M5 609 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 C7orf72A4D263 438 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CPSF4LA6NMK7 179 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 RFXAPO00287 272 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 IRAK2O43187 625 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ATG13O75143 517 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CLDN7O95471 211 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 HOXB2P14652 356 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 GDF5P43026 501 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CLCNKAP51800 687 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ZNF135P52742 658 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 RPL26P61254 145 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 USP46P62068 366 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 SKP1P63208 163 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 PPP1R8Q12972 351 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 HSPB3Q12988 150 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CHIT1Q13231 466 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 NFATC2Q13469 925 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 PDGFRLQ15198 375 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 VPS26BQ4G0F5 336 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 XKR4Q5GH76 650 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 TECRLQ5HYJ1 363 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 SAMD4BQ5PRF9 694 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 KIAA0930Q6ICG6 404 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CASP12Q6UXS9 341 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 LYSMD3Q7Z3D4 306 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM47BQ8NA70 645 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 TMEM145Q8NBT3 493 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CANT1Q8WVQ1 401 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 NCSTNQ92542 709 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 PGAP3Q96FM1 320 aaPredicted RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC29A1Q99808 456 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 RIOK2Q9BVS4 552 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ADAP2Q9NPF8 381 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 RHBDL2Q9NX52 303 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 TOR4AQ9NXH8 423 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 NCDNQ9UBB6 729 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 DMTF1Q9Y222 760 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 MRPS17Q9Y2R5 130 aaKnown RBP8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 MAP4K5Q9Y4K4 846 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 CROCCQ5TZA2 2017 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 A0A0J9YVX5 310 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ABHD14A-ACY1A0A1B0GW23 586 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 FBP2O00757 339 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 ASLP04424 464 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 SPAM1P38567 509 aa8.12□□□□□ -1.11
PTPDC1-204ENST00000620992 RHDQ02161 417 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms