RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SLC22A8Q8TCC7 542 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 TWIST2Q8WVJ9 160 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 FKBP10Q96AY3 582 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 CLSTN3Q9BQT9 956 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SERHL2Q9H4I8 314 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SP140LQ9H930 580 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 TIGARQ9NQ88 270 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SERHLQ9NQF3 203 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SEC14L3Q9UDX4 400 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SIX4Q9UIU6 781 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 EDARQ9UNE0 448 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 ENTPD2Q9Y5L3 495 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 A0A1W2PQU0 124 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 CENPXA8MT69 81 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 EIF3FO00303 357 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 BPGMP07738 259 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 BMP6P22004 513 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 GRK6P43250 576 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 RAB28P51157 221 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SPIBQ01892 262 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 PTSQ03393 145 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 DNM1P34Q6PK57 102 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 IL22RA1Q8N6P7 574 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SLC5A11Q8WWX8 675 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 KIAA1191Q96A73 305 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 AGAP2Q99490 1192 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 LRMDAQ9H2I8 198 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 Q9N2J8 555 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 BTRCQ9Y297 605 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 NOX1Q9Y5S8 564 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SNX10Q9Y5X0 201 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 PRG2P13727 222 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 DPYSQ14117 519 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 RNF43Q68DV7 783 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 TYW3Q6IPR3 259 aaKnown RBP9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SLC8B1Q6J4K2 584 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 PIGXQ8TBF5 258 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 ZDHHC1Q8WTX9 485 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 EXOSC8Q96B26 276 aaKnown RBP9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SLC47A1Q96FL8 570 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 DCLRE1BQ9H816 532 aa9.55□□□□□ -0.88
TNFRSF9-204ENST00000615230 SCDO00767 359 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 COX4I1P13073 169 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 NMBRP28336 390 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 SOX11P35716 441 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CPA2P48052 419 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 ZNF41P51814 821 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CRISP3P54108 245 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CYP1B1Q16678 543 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 SLC44A4Q53GD3 710 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 ADGRD1Q6QNK2 874 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CCDC81Q6ZN84 652 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 GPR141Q7Z602 305 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 DHDDSQ86SQ9 333 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 SIX5Q8N196 739 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 LINC00471Q8N535 108 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 SPATA22Q8NHS9 363 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 FBXO30Q8TB52 745 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 FAR1Q8WVX9 515 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 ARHGEF3Q9NR81 526 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 PDP2Q9P2J9 529 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 A0A1W2PP55 124 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 GPR37L1O60883 481 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 RPS3AP61247 264 aaKnown RBP9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 RBPJQ06330 500 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 PWP1Q13610 501 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 TCEAL6Q6IPX3 200 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 OR2AJ1Q8NGZ0 328 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 SLC9A6Q92581 669 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 PGAP3Q96FM1 320 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 APOLD1Q96LR9 279 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 HIST1H2AAQ96QV6 131 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 ANKZF1Q9H8Y5 726 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 OSER1Q9NX31 292 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CCDC162PA2VCL2 907 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 NDUFS4O43181 175 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 EPCAMP16422 314 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CEBPBP17676 345 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 ARFIP1P53367 373 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 HTRA3P83110 453 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 PIK3R6Q5UE93 754 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 TTC23Q5W5X9 447 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 KIAA0895LQ68EN5 471 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 AADACL2Q6P093 401 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 KBTBD2Q8IY47 623 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 DEFB123Q8N688 67 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 RASGEF1AQ8N9B8 481 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 RHBDD1Q8TEB9 315 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CDKN2AIPNLQ96HQ2 116 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 RTKNQ9BST9 563 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 TRIM39Q9HCM9 518 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 MKKSQ9NPJ1 570 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 CHST10O43529 356 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 SNAP91O60641 907 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 SIN3BO75182 1162 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 ITGB7P26010 798 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 E2F1Q01094 437 aa9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 NRG1Q02297 640 aaPredicted RBP9.54□□□□□ -0.88
TNFRSF9-204ENST00000615230 DMTNQ08495 405 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms