RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PTCRAQ6ISU1 281 aaPredicted RBP10.65□□□□□ -0.7
FAM3A-221ENST00000612856 ANKRD33Q7Z3H0 272 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 RBFAQ8N0V3 343 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 SLC6A17Q9H1V8 727 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 TRPV5Q9NQA5 729 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 BACE2Q9Y5Z0 518 aa10.65□□□□□ -0.7
FAM3A-221ENST00000612856 BCLAF3A2AJT9 711 aaKnown RBP10.65□□□□□ -0.71
FAM3A-221ENST00000612856 ANKDD1BA6NHY2 528 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 SAP18O00422 153 aaKnown RBP10.65□□□□□ -0.71
FAM3A-221ENST00000612856 PLOD2O00469 737 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 NRP2O60462 931 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 ADSLP30566 484 aaPredicted RBP10.65□□□□□ -0.71
FAM3A-221ENST00000612856 PRIM2P49643 509 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 MINDY4Q4G0A6 757 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 UBE2UQ5VVX9 321 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 ALKBH2Q6NS38 261 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 NEK10Q6ZWH5 1172 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 ARCQ7LC44 396 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 PIWIL3Q7Z3Z3 882 aaKnown RBP10.65□□□□□ -0.71
FAM3A-221ENST00000612856 TSPAN33Q86UF1 283 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 SPNS2Q8IVW8 549 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 LMLNQ96KR4 655 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 RSPH9Q9H1X1 276 aaPredicted RBP10.65□□□□□ -0.71
FAM3A-221ENST00000612856 ZC4H2Q9NQZ6 224 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 CA5BQ9Y2D0 317 aa10.65□□□□□ -0.71
FAM3A-221ENST00000612856 TET1Q8NFU7 2136 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 C7orf72A4D263 438 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 SIX3O95343 332 aaPredicted RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 RB1P06400 928 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 LTA4HP09960 611 aaKnown RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 LINC00032P0C843 101 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CD247P20963 164 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 FASP25445 335 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 PSMA4P25789 261 aaKnown RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CLK1P49759 484 aaKnown RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CLCNKAP51800 687 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 KCNK10P57789 538 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 RAB10P61026 200 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 DSC1Q08554 894 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 ACSM2AQ08AH3 577 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 PMS2P3Q13401 168 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CYP51A1Q16850 503 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 LSM12Q3MHD2 195 aaKnown RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 HECTD2Q5U5R9 776 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 ACSM2BQ68CK6 577 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CLEC6AQ6EIG7 209 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 PIWIL4Q7Z3Z4 852 aaKnown RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 GPR180Q86V85 440 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 LRRC49Q8IUZ0 686 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 TCEAL8Q8IYN2 117 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 ZCCHC10Q8TBK6 192 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 STAG3L4Q8TBR4 150 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 DLG3Q92796 817 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 NTAN1Q96AB6 310 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 C12orf66Q96MD2 445 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 TSSK3Q96PN8 268 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 TEKT2Q9UIF3 430 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 PLAGL1Q9UM63 463 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 OR1A2Q9Y585 309 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 PCDHA11Q9Y5I1 949 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CACNA1CQ13936 2221 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CLDN25C9JDP6 229 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 AURKAO14965 403 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 MID1O15344 667 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 RPP40O75818 363 aaKnown RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 PSMB9P28065 219 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 GABRB2P47870 512 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 GRIA4P48058 902 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 SLC7A2P52569 658 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 PRKAA2P54646 552 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 SLC18A2Q05940 514 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 SLC13A2Q13183 592 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 RAB39AQ14964 217 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 ZNF362Q5T0B9 420 aaPredicted RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 FSTL4Q6MZW2 842 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 USP53Q70EK8 1073 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 SPPL2CQ8IUH8 684 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 DEPDC4Q8N2C3 294 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CANT1Q8WVQ1 401 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 LRCH3Q96II8 777 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 COPG2Q9UBF2 871 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 MYO10Q9HD67 2058 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 FAM170BA6NMN3 283 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 A8MV72 311 aaPredicted RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 H3BNH8 94 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 APOA1P02647 267 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 KLKB1P03952 638 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 SLC6A4P31645 630 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 RPL6Q02878 288 aaKnown RBP10.64□□□□□ -0.71
FAM3A-221ENST00000612856 STX5Q13190 355 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 NFATC2Q13469 925 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 ABRAXAS1Q6UWZ7 409 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 STK32CQ86UX6 486 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CDKN2AIPNLQ96HQ2 116 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 ZSWIM3Q96MP5 696 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CDK15Q96Q40 435 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 ADI1Q9BV57 179 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 RIC8BQ9NVN3 520 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 CD207Q9UJ71 328 aa10.64□□□□□ -0.71
FAM3A-221ENST00000612856 GNPTGQ9UJJ9 305 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms