RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 STRADAQ7RTN6 431 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 GALNT13Q8IUC8 556 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 RIOX2Q8IUF8 465 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 NAT16Q8N8M0 369 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 OR5K1Q8NHB7 308 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 SGCDQ92629 289 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PCBD2Q9H0N5 130 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 HIPK3Q9H422 1215 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 BRD7Q9NPI1 651 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 TCAF2A6NFQ2 919 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 OR1F1O43749 312 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 YES1P07947 543 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 CPN2P22792 545 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 ZNF460Q14592 562 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 LCLAT1Q6UWP7 414 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 PAMR1Q6UXH9 720 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 RAB11FIP2Q7L804 512 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 XYLT1Q86Y38 959 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 MKL1Q969V6 931 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 B3GNT5Q9BYG0 378 aa9.45□□□□□ -0.9
CSMD1-217ENST00000602723 SPIN1Q9Y657 262 aaPredicted RBP9.45□□□□□ -0.9
CSMD1-217ENST00000602723 MYCLP1P12525 358 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 NDUFA9Q16795 377 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ZBED5Q49AG3 693 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 EIF5AL1Q6IS14 154 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CFAP206Q8IYR0 622 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 TLCD1Q96CP7 247 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 TMEM168Q9H0V1 697 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 LAMA4Q16363 1823 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CLDN4O14493 209 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CHRM5P08912 532 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 AVPR1BP47901 424 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 TARBP2Q15633 366 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 TDRPQ86YL5 185 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 TRIM43Q96BQ3 446 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ZBED6CLQ96FA7 236 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 RBM18Q96H35 190 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 MYOCQ99972 504 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 POLR3BQ9NW08 1133 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 UNC13CQ8NB66 2214 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 OR2AG2A6NM03 316 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 STBD1O95210 358 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 RASGRP1O95267 797 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CSTF2P33240 577 aaKnown RBP eCLIP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CLCN7P51798 805 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 RAB12Q6IQ22 244 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 SLC13A3Q8WWT9 602 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ATRNO75882 1429 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 FXYD6-FXYD2A0A087WZ82 144 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ACOX3O15254 700 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 TLX3O43711 291 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 NOL4O94818 638 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CSN2P05814 226 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CCNFP41002 786 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 SMG7Q92540 1137 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 JSRP1Q96MG2 331 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ZSCAN5AQ9BUG6 496 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 FXYD6Q9H0Q3 95 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 FAM234BA2RU67 622 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 FFAR2O15552 330 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 UBXN7O94888 489 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 NMBRP28336 390 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 PPM1AP35813 382 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 S100A10P60903 97 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 HERVK_113P63132 956 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 LRRC57Q8N9N7 239 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ERVK-6Q9BXR3 956 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 NUSAP1Q9BXS6 441 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 EIF2B3Q9NR50 452 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CFAP97Q9P2B7 532 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ARFGEF2Q9Y6D5 1785 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 L7N2F9 121 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 IL7RP16871 459 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 STOMP27105 288 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 SLC6A9P48067 706 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 JAM2P57087 298 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 VAMP2P63027 116 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 MAB21L3Q8N8X9 362 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 LMLNQ96KR4 655 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 POLR2J2Q9GZM3 115 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 SLC25A51Q9H1U9 297 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 DCSTAMPQ9H295 470 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 TREM1Q9NP99 234 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CUEDC1Q9NWM3 386 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 SHPRHQ149N8 1683 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 ADAMTS13Q76LX8 1427 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 NOTOA8MTQ0 251 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 PNLIPRP1P54315 467 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 GNA12Q03113 381 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CAND1Q86VP6 1230 aaKnown RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 NXPE2Q96DL1 559 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 FEM1CQ96JP0 617 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 GAL3ST4Q96RP7 486 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 FBXO9Q9UK97 447 aaPredicted RBP9.44□□□□□ -0.9
CSMD1-217ENST00000602723 B4GALT4O60513 344 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 MAP3K8P41279 467 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 CLEC12AQ5QGZ9 265 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 FKBP1CQ5VVH2 108 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 SYCE2Q6PIF2 218 aa9.44□□□□□ -0.9
CSMD1-217ENST00000602723 PPTC7Q8NI37 304 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms