RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	TLCD1	Q96CP7	247 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	CXorf40B	Q96DE9	158 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	UBXN10	Q96LJ8	280 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	C12orf66	Q96MD2	445 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	DERL2	Q9GZP9	239 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	STN1	Q9H668	368 aa	Known RBP	21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	NMRAL1	Q9HBL8	299 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	MED4	Q9NPJ6	270 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	LRIT1	Q9P2V4	623 aa		21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	RUVBL2	Q9Y230	463 aa	Known RBP	21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	CFAP20	Q9Y6A4	193 aa	Known RBP	21.41	■■□□□ 1.02
LTBP4-227	ENST00000600026	RP1	P56715	2156 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	PPM1D	O15297	605 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	NUDT21	O43809	227 aa	Known RBP	21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	GLRA3	O75311	464 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	RFPL3	O75679	317 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	FTH1P19	P0C7X4	201 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	MTHFD1	P11586	935 aa	Known RBP	21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	XRCC1	P18887	633 aa	Predicted RBP	21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	MAPK9	P45984	424 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	MAGOH	P61326	146 aa	Known RBP	21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	CCDC157	Q569K6	752 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	VRK3	Q8IV63	474 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	AVL9	Q8NBF6	648 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	KCTD4	Q8WVF5	259 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	ANKRD49	Q8WVL7	239 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	FOPNL	Q96NB1	174 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	IQCG	Q9H095	443 aa	Known RBP	21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	POT1	Q9NUX5	634 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	IMP3	Q9NV31	184 aa	Known RBP	21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	TSR3	Q9UJK0	312 aa	Known RBP	21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	CACNA1B	Q00975	2339 aa		21.4	■■□□□ 1.02
LTBP4-227	ENST00000600026	EPG5	Q9HCE0	2579 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	PRAMEF33	A0A0G2JMD5	474 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	RHPN2P1	A8MT19	583 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	IFRD1	O00458	451 aa	Predicted RBP	21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	SYF2	O95926	243 aa	Known RBP	21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	VIP	P01282	170 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	GP1BA	P07359	652 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	TTMP	Q5BVD1	217 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	SH2D5	Q6ZV89	423 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	PIWIL4	Q7Z3Z4	852 aa	Known RBP	21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	ZNF438	Q7Z4V0	828 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	CLEC14A	Q86T13	490 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	SLCO6A1	Q86UG4	719 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	SPNS2	Q8IVW8	549 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	CENPL	Q8N0S6	344 aa	Predicted RBP	21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	NXNL1	Q96CM4	212 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	APOPT1	Q96IL0	206 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	CCDC3	Q9BQI4	270 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	SSU72	Q9NP77	194 aa	Known RBP	21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	MKS1	Q9NXB0	559 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	PCDHGA1	Q9Y5H4	931 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	COL27A1	Q8IZC6	1860 aa	Predicted RBP	21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	ASXL3	Q9C0F0	2248 aa		21.39	■■□□□ 1.01
LTBP4-227	ENST00000600026	TSPAN12	O95859	305 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	CD1D	P15813	335 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	PNLIP	P16233	465 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	CRHR1	P34998	444 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	ABR	Q12979	859 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	ILK	Q13418	452 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	NR1D2	Q14995	579 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	ZNF761	Q86XN6	746 aa	Predicted RBP	21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	SPATA6L	Q8N4H0	392 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	BANP	Q8N9N5	519 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	IGSF5	Q9NSI5	407 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	GRID1	Q9ULK0	1009 aa		21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	APOBEC2	Q9Y235	224 aa	Known RBP	21.38	■■□□□ 1.01
LTBP4-227	ENST00000600026	KMT2B	Q9UMN6	2715 aa	Predicted RBP	21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	CCDC189	A1A4V9	331 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	SPAG7	O75391	227 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	DKK1	O94907	266 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	ACADL	P28330	430 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	GMPR	P36959	345 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	DLG1	Q12959	904 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	ACAP2	Q15057	778 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	CYHR1	Q6ZMK1	362 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	PLD6	Q8N2A8	252 aa	Known RBP	21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	SH3KBP1	Q96B97	665 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	SCYL1	Q96KG9	808 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	SLC38A3	Q99624	504 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	KCNK9	Q9NPC2	374 aa		21.37	■■□□□ 1.01
LTBP4-227	ENST00000600026	PABPN1L	A6NDY0	278 aa	Known RBP	21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	BTN3A1	O00481	513 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	C8G	P07360	202 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	RBP1	P09455	135 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	TFEB	P19484	476 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	TMEM26	Q6ZUK4	368 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	SPRED1	Q7Z699	444 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	RBM12B	Q8IXT5	1001 aa	Known RBP	21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026		Q8N9G6	341 aa	Predicted RBP	21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	CFAP61	Q8NHU2	1237 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	TFG	Q92734	400 aa	Predicted RBP	21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	UNK	Q9C0B0	810 aa	Known RBP	21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	TFB2M	Q9H5Q4	396 aa	Known RBP	21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	SLC40A1	Q9NP59	571 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	HEBP2	Q9Y5Z4	205 aa		21.36	■■□□□ 1.01
LTBP4-227	ENST00000600026	ANKRD12	Q6UB98	2062 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	NPEPPSL1	A6NEC2	478 aa		21.35	■■□□□ 1.01
LTBP4-227	ENST00000600026	CASC3	O15234	703 aa	Known RBP	21.35	■■□□□ 1.01

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms