RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 C20orf96Q9NUD7 363 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-212ENST00000590260 ACTR10Q9NZ32 417 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 SLC17A6Q9P2U8 582 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 BTRCQ9Y297 605 aa17.66■□□□□ 0.42
DDX39A-212ENST00000590260 TDRKHQ9Y2W6 561 aaKnown RBP17.66■□□□□ 0.42
DDX39A-212ENST00000590260 AHCTF1Q8WYP5 2266 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 LOC101059948A0A1B0GTJ6 334 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 HCRTR1O43613 425 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 HAUS5O94927 633 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 ESR1P03372 595 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 APOA4P06727 396 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 PKMP14618 531 aaKnown RBP17.65■□□□□ 0.42
DDX39A-212ENST00000590260 GABRB3P28472 473 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 PKLRP30613 574 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 CASQ1P31415 396 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 PAFAH1B1P43034 410 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 CLCN7P51798 805 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 UCNP55089 124 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 C2orf54Q08AI8 447 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 GPR19Q15760 415 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 KYNUQ16719 465 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 HSP90AA5PQ58FG0 334 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 DNAJC21Q5F1R6 531 aaKnown RBP17.65■□□□□ 0.42
DDX39A-212ENST00000590260 PLEKHS1Q5SXH7 462 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 RNF187Q5TA31 235 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-212ENST00000590260 KIAA1614Q5VZ46 1190 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 CNSTQ6PJW8 725 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 CCDC81Q6ZN84 652 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 PCGF5Q86SE9 256 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 TRIM73Q86UV7 250 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 KMT5CQ86Y97 462 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 SIDT2Q8NBJ9 832 aaKnown RBP17.65■□□□□ 0.42
DDX39A-212ENST00000590260 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.65■□□□□ 0.42
DDX39A-212ENST00000590260 ZNF501Q96CX3 271 aaPredicted RBP17.65■□□□□ 0.42
DDX39A-212ENST00000590260 IL17FQ96PD4 163 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 PANX3Q96QZ0 392 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 TSSK1BQ9BXA7 367 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 KLHL25Q9H0H3 589 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 INTS10Q9NVR2 710 aaKnown RBP17.65■□□□□ 0.42
DDX39A-212ENST00000590260 TEX264Q9Y6I9 313 aa17.65■□□□□ 0.42
DDX39A-212ENST00000590260 ATMQ13315 3056 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 GSAPA4D1B5 854 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 RAD51CO43502 376 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 SPAG6O75602 509 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 ZBTB11O95625 1053 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-212ENST00000590260 CHRM5P08912 532 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-212ENST00000590260 ERVK-10P10266 1014 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 LIFP15018 202 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 UGT2B7P16662 529 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 ELK3P41970 407 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 BDKRB1P46663 353 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 HSD11B2P80365 405 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 IL11RAQ14626 422 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 FASTKD3Q14CZ7 662 aaKnown RBP17.64■□□□□ 0.41
DDX39A-212ENST00000590260 ZIC1Q15915 447 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 BBS9Q3SYG4 887 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 ACSBG2Q5FVE4 666 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 PWWP2BQ6NUJ5 590 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 UNC5DQ6UXZ4 953 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 KCNMB4Q86W47 210 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 FAM20CQ8IXL6 584 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 CACNA2D3Q8IZS8 1091 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 CFAP61Q8NHU2 1237 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 DENND1AQ8TEH3 1009 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 RUNDC3BQ96NL0 473 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 TRAPPC9Q96Q05 1148 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 ZPBPQ9BS86 351 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 AKIRIN1Q9H9L7 192 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-212ENST00000590260 C1GALT1Q9NS00 363 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 IARS2Q9NSE4 1012 aaKnown RBP17.64■□□□□ 0.41
DDX39A-212ENST00000590260 POLG2Q9UHN1 485 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 TSR3Q9UJK0 312 aaKnown RBP17.64■□□□□ 0.41
DDX39A-212ENST00000590260 FBXO5Q9UKT4 447 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 SNX24Q9Y343 169 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 PCDHGA4Q9Y5G9 962 aa17.64■□□□□ 0.41
DDX39A-212ENST00000590260 SNRNP200O75643 2136 aaKnown RBP17.63■□□□□ 0.41
DDX39A-212ENST00000590260 PIPSLA2A3N6 862 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 F8W8V4 182 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 TERTO14746 1132 aaKnown RBP17.63■□□□□ 0.41
DDX39A-212ENST00000590260 KIAA0754O94854 1291 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 MATN4O95460 622 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 C1orf105O95561 183 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 CDH3P22223 829 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 F8A1P23610 371 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 SHMT2P34897 504 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 GABRA4P48169 554 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 PRKAA1Q13131 559 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 TUBB3Q13509 450 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 THOC5Q13769 683 aaKnown RBP17.63■□□□□ 0.41
DDX39A-212ENST00000590260 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.63■□□□□ 0.41
DDX39A-212ENST00000590260 MANEAQ5SRI9 462 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 PRAMEF17Q5VTA0 474 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 STEAP4Q687X5 459 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 ARMC6Q6NXE6 501 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 TRMT10BQ6PF06 316 aaKnown RBP17.63■□□□□ 0.41
DDX39A-212ENST00000590260 SPESP1Q6UW49 350 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 OTOAQ7RTW8 1153 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 ZNF572Q7Z3I7 529 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-212ENST00000590260 RASGRP3Q8IV61 690 aa17.63■□□□□ 0.41
DDX39A-212ENST00000590260 CARFQ8N187 725 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms