RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 LINC01599Q8WXQ3 324 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 TRIB2Q92519 343 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 ULK4Q96C45 1275 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 ERLEC1Q96DZ1 483 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 FAM120BQ96EK7 910 aaKnown RBP13.42□□□□□ -0.26
RNF43-205ENST00000581868 SH3YL1Q96HL8 342 aaPredicted RBP13.42□□□□□ -0.26
RNF43-205ENST00000581868 FAM126AQ9BYI3 521 aaPredicted RBP13.42□□□□□ -0.26
RNF43-205ENST00000581868 LRTM1Q9HBL6 345 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 DCAF13Q9NV06 445 aaKnown RBP13.42□□□□□ -0.26
RNF43-205ENST00000581868 USE1Q9NZ43 259 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 IL17CQ9P0M4 197 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 PCDHB14Q9Y5E9 798 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 ORC6Q9Y5N6 252 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 PRSS21Q9Y6M0 314 aa13.42□□□□□ -0.26
RNF43-205ENST00000581868 ILVBLA1L0T0 632 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 OR6C75A6NL08 312 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 LOC730098B7Z3J9 87 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 NDUFS2O75306 463 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 EOMESO95936 686 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 IL6P05231 212 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 GABARAPL2P60520 117 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 ARF5P84085 180 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 SIM2Q14190 667 aaPredicted RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 ZNF691Q5VV52 312 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 NIPAL1Q6NVV3 410 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 DCP2Q8IU60 420 aaKnown RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 PDLIM5Q96HC4 596 aaKnown RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 SH3GL1Q99961 368 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 NEURL2Q9BR09 285 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 DAPK2Q9UIK4 370 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 ENPP5Q9UJA9 477 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 FBXO10Q9UK96 956 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 GOLGA8CPA6NN73 597 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 SLC28A1O00337 649 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 BCKDKO14874 412 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 INPPL1O15357 1258 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 SERPINB7O75635 380 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 PARNO95453 639 aaKnown RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 PRAMEF1O95521 474 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 RPLP2P05387 115 aaKnown RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 ZDHHC11BP0C7U3 371 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 CORO1AP31146 461 aaKnown RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 FMO3P31513 532 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 HUNKP57058 714 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 MAD2L1Q13257 205 aaPredicted RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 GPR17Q13304 367 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 RAPSNQ13702 412 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 SLCO6A1Q86UG4 719 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 CD244Q9BZW8 370 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.41□□□□□ -0.262e-6■■□□□ 14
RNF43-205ENST00000581868 KAT8Q9H7Z6 458 aaKnown RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 TMEM165Q9HC07 324 aa13.41□□□□□ -0.26
RNF43-205ENST00000581868 TMEFF2Q9UIK5 374 aaPredicted RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 FCF1Q9Y324 198 aaKnown RBP13.41□□□□□ -0.26
RNF43-205ENST00000581868 A8MX80 341 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ZNF99A8MXY4 864 aaPredicted RBP13.4□□□□□ -0.26
RNF43-205ENST00000581868 CLDN25C9JDP6 229 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 H7C0S8 307 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 AREL1O15033 823 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 CD160O95971 181 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ZNF7P17097 686 aaPredicted RBP13.4□□□□□ -0.26
RNF43-205ENST00000581868 ATF6P18850 670 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 PCMT1P22061 227 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 MAP2K4P45985 399 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 RGS4P49798 205 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 GATMP50440 423 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 EMX1Q04741 257 aaPredicted RBP13.4□□□□□ -0.26
RNF43-205ENST00000581868 CDK5R2Q13319 367 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 TOP3AQ13472 1001 aaPredicted RBP13.4□□□□□ -0.26
RNF43-205ENST00000581868 GTF2H3Q13889 308 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.26
RNF43-205ENST00000581868 CTF1Q16619 201 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 CPSF6Q16630 551 aaKnown RBP eCLIP13.4□□□□□ -0.26
RNF43-205ENST00000581868 CES5AQ6NT32 575 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 NCEH1Q6PIU2 408 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 LRRC8DQ7L1W4 858 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ZCCHC7Q8N3Z6 543 aaKnown RBP13.4□□□□□ -0.26
RNF43-205ENST00000581868 SPATA17Q96L03 361 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ZNF347Q96SE7 839 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 BARD1Q99728 777 aaKnown RBP13.4□□□□□ -0.26
RNF43-205ENST00000581868 INPP5KQ9BT40 448 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 RIBC2Q9H4K1 309 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 CLMPQ9H6B4 373 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ASB8Q9H765 288 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 LATS2Q9NRM7 1088 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 VNN3Q9NY84 501 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ERVK-18Q9QC07 812 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 PCDHB1Q9Y5F3 818 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ADAMTS4O75173 837 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ZNF682O95780 498 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 GLUD1P00367 558 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 BCKDHAP12694 445 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 RHOAP61586 193 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 PHC1P78364 1004 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 CD300CQ08708 224 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 ARHGEF7Q14155 803 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
RNF43-205ENST00000581868 PGS1Q32NB8 556 aa13.4□□□□□ -0.26
RNF43-205ENST00000581868 RTP2Q5QGT7 225 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms