RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 THOP1P52888 689 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PDX1P52945 283 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PGGT1BP53609 377 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PLTPP55058 493 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ARL4CP56559 192 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 VSNL1P62760 191 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 UBE2IP63279 158 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 MPP1Q00013 466 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CAV1Q03135 178 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PPARDQ03181 441 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC14A1Q13336 389 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CTBP1Q13363 440 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 C1orf61Q13536 156 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PTK2BQ14289 1009 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 GRB7Q14451 532 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 HLTFQ14527 1009 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 EFTUD2Q15029 972 aaKnown RBP eCLIP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SMAD1Q15797 465 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 LONRF1Q17RB8 773 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SKIDA1Q1XH10 827 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 BBS9Q3SYG4 887 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 LDLRAP1Q5SW96 308 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 RBM20Q5T481 1227 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 AGAP9Q5VTM2 703 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CAPRIN2Q6IMN6 1127 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CCDC70Q6NSX1 233 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 NEPROQ6NW34 567 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 WDR93Q6P2C0 686 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ZNF449Q6P9G9 518 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CNSTQ6PJW8 725 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 DOK6Q6PKX4 331 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CRTC3Q6UUV7 619 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 IL27RAQ6UWB1 636 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ENPP7Q6UWV6 458 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 TMEM207Q6UWW9 146 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ABRAXAS1Q6UWZ7 409 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 WASH2PQ6VEQ5 465 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 MARK2Q7KZI7 788 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 VRK3Q8IV63 474 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SLC35F3Q8IY50 421 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 KIAA2013Q8IYS2 634 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PDIK1LQ8N165 341 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 KYQ8NBH2 561 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 BBOF1Q8ND07 529 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 MNS1Q8NEH6 495 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 OR4C6Q8NH72 309 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 GSDMBQ8TAX9 411 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 AENQ8WTP8 325 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 MZB1Q8WU39 189 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PATE1Q8WXA2 126 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ULK4Q96C45 1275 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SGF29Q96ES7 293 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 C9orf72Q96LT7 481 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 RMDN2Q96LZ7 410 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 OR2M4Q96R27 311 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 RHOXF2Q9BQY4 288 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 NAT9Q9BTE0 207 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 DHRS4Q9BTZ2 278 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 NUSAP1Q9BXS6 441 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 FOXP3Q9BZS1 431 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 OR52A5Q9H2C5 316 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CDC42EP4Q9H3Q1 356 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 RMI1Q9H9A7 625 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SAYSD1Q9NPB0 183 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 TMEM9BQ9NQ34 198 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 WASH6PQ9NQA3 447 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 FAM114A2Q9NRY5 505 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CATSPERZQ9NTU4 200 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 INTS10Q9NVR2 710 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 DNAJC28Q9NX36 388 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 NLGN3Q9NZ94 848 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 ZNF624Q9P2J8 865 aaPredicted RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 KLQ9UEF7 1012 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 TBC1D29Q9UFV1 150 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 APOBEC3BQ9UH17 382 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 IKZF3Q9UKT9 509 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 RAB21Q9UL25 225 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 RAB23Q9ULC3 237 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 NFU1Q9UMS0 254 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 GPR34Q9UPC5 381 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 UTP11Q9Y3A2 253 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 PCSK5Q92824 1860 aa3.71□□□□□ -1.82
SMARCE1-215ENST00000578995 SEC16AO15027 2179 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 CHD8Q9HCK8 2581 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 SCN3AQ9NY46 2000 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 C17orf113A0A1B0GUU1 675 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 A0A1W2PNU3 283 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 EME2A4GXA9 379 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 MGAT4DA6NG13 374 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 OR2AG2A6NM03 316 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 PRMT5O14744 637 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 GIPC1O14908 333 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 PPM1DO15297 605 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 YKT6O15498 198 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 FLRT2O43155 660 aa3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 CTIFO43310 598 aaKnown RBP3.7□□□□□ -1.82
SMARCE1-215ENST00000578995 SIGLEC6O43699 453 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms