RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 NLGN4YQ8NFZ3 816 aaPredicted RBP13.54□□□□□ -0.24
GGA3-203ENST00000577435 OR8K5Q8NH50 307 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 LRRC39Q96DD0 335 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 NRTNQ99748 197 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 XKR8Q9H6D3 395 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 SYTL2Q9HCH5 934 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 PDE7BQ9NP56 450 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 C20orf96Q9NUD7 363 aaPredicted RBP13.54□□□□□ -0.24
GGA3-203ENST00000577435 KLHL42Q9P2K6 505 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 CRYL1Q9Y2S2 319 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 MRFAP1Q9Y605 127 aa13.54□□□□□ -0.24
GGA3-203ENST00000577435 PIPSLA2A3N6 862 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 NDC80O14777 642 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 TP73O15350 636 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 SPAG6O75602 509 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 STK17BO94768 372 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 CDH3P22223 829 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 ARL4DP49703 201 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 TUBB4BP68371 445 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 RHDQ02161 417 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 ABRQ12979 859 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 CTBP1Q13363 440 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 GRB7Q14451 532 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 SPANXN3Q5MJ09 141 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 TMTC4Q5T4D3 741 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 ZNF470Q6ECI4 717 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 TIPARPQ7Z3E1 657 aaKnown RBP13.53□□□□□ -0.24
GGA3-203ENST00000577435 PPP1R3BQ86XI6 285 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 DCUN1D3Q8IWE4 304 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 DENND6AQ8IWF6 608 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 PDIK1LQ8N165 341 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 LSM14AQ8ND56 463 aaKnown RBP13.53□□□□□ -0.24
GGA3-203ENST00000577435 SPATA4Q8NEY3 305 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 SNF8Q96H20 258 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 PPM1MQ96MI6 270 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 UBL7Q96S82 380 aaPredicted RBP13.53□□□□□ -0.24
GGA3-203ENST00000577435 KRT12Q99456 494 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 MENTQ9BUN1 341 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 CHRNA10Q9GZZ6 450 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 ACTR10Q9NZ32 417 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 IL1RAPL1Q9NZN1 696 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 FBXO5Q9UKT4 447 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 RARRES3Q9UL19 164 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 TDRKHQ9Y2W6 561 aaKnown RBP13.53□□□□□ -0.24
GGA3-203ENST00000577435 COMMD10Q9Y6G5 202 aa13.53□□□□□ -0.24
GGA3-203ENST00000577435 GSAPA4D1B5 854 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 FAM187AA6NFU0 413 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 SLC9B1P1A6NJY1 282 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 EFCAB8A8MWE9 144 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 NIPSNAP2O75323 286 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 MATN4O95460 622 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 CHRM5P08912 532 aaPredicted RBP13.52□□□□□ -0.25
GGA3-203ENST00000577435 EBLN1P0CF75 366 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 CHRM3P20309 590 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 RAB28P51157 221 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 ITGA8P53708 1063 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 ABHD18Q0P651 414 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 SRSF6Q13247 344 aaKnown RBP13.52□□□□□ -0.25
GGA3-203ENST00000577435 TUBB3Q13509 450 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 CRYMQ14894 314 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 BBS9Q3SYG4 887 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 HSP90AA5PQ58FG0 334 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 SPESP1Q6UW49 350 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 SYT10Q6XYQ8 523 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 MAATS1Q7Z4T9 603 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 KCNMB4Q86W47 210 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 IGDCC3Q8IVU1 814 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 CNTN4Q8IWV2 1026 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 ESX1Q8N693 406 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 IL22RA1Q8N6P7 574 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 FLVCR1-AS1Q8TAF5 88 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 GABPB2Q8TAK5 448 aaPredicted RBP13.52□□□□□ -0.25
GGA3-203ENST00000577435 GSDMBQ8TAX9 411 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 WBP1Q96G27 269 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 TRAPPC9Q96Q05 1148 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 OR2A14Q96R47 310 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 TRIM51Q9BSJ1 452 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 FAM167BQ9BTA0 163 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 FGF21Q9NSA1 209 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 RALYQ9UKM9 306 aaKnown RBP13.52□□□□□ -0.25
GGA3-203ENST00000577435 MED16Q9Y2X0 877 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 PIEZO2Q9H5I5 2752 aa13.52□□□□□ -0.25
GGA3-203ENST00000577435 ATRXP46100 2492 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 E7ESA3 106 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 C1orf105O95561 183 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 MT-ND3P03897 115 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 UGT2B7P16662 529 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 ZNF28P17035 718 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 PKLRP30613 574 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 CCNFP41002 786 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 SLC1A2P43004 574 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 CLCN7P51798 805 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 ARL4CP56559 192 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 FRG1Q14331 258 aaKnown RBP13.51□□□□□ -0.25
GGA3-203ENST00000577435 KCNAB1Q14722 419 aa13.51□□□□□ -0.25
GGA3-203ENST00000577435 KIR2DS3Q14952 304 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms