RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 LRIT3Q3SXY7 679 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 AASDHQ4L235 1098 aaPredicted RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 IRAK1BP1Q5VVH5 260 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 HLA-DQA1Q5Y7H0 255 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 TAGAPQ8N103 731 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 TWIST2Q8WVJ9 160 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 NUSAP1Q9BXS6 441 aaKnown RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 PLA2G2FQ9BZM2 168 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 MMP17Q9ULZ9 603 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 PLAGL1Q9UM63 463 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 DLX3O60479 287 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 HPGDP15428 266 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 CALB2P22676 271 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 NFE2L1Q14494 772 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 ZNF789Q5FWF6 425 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 SUSD1Q6UWL2 747 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 DSELQ8IZU8 1212 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 Q8N9G6 341 aaPredicted RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 SMRP1Q8NCR6 262 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 OLIG1Q8TAK6 271 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 FATE1Q969F0 183 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 KLHL25Q9H0H3 589 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 SLC32A1Q9H598 525 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 LRTM1Q9HBL6 345 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 PPM1HQ9ULR3 514 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 NFS1Q9Y697 457 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 OR10H2O60403 315 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 PROCP04070 461 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 ALDOAP04075 364 aaKnown RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 FOXN2P32314 431 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 ZNF140P52738 457 aaPredicted RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 WDR4P57081 412 aaKnown RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 HERVK_113P63132 956 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 KRT72Q14CN4 511 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 LYSMD4Q5XG99 296 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 TRIM40Q6P9F5 258 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 ZC3H14Q6PJT7 736 aaKnown RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 TIFABQ6ZNK6 161 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 PLD6Q8N2A8 252 aaKnown RBP9.89□□□□□ -0.83
SMG6-213ENST00000573166 KYQ8NBH2 561 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 OR9A1PQ8NGU1 263 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 ZCCHC10Q8TBK6 192 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 ADAMTS19Q8TE59 1207 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 C19orf60Q96EN9 201 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 ERVK-6Q9BXR3 956 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 XKR8Q9H6D3 395 aa9.89□□□□□ -0.83
SMG6-213ENST00000573166 CBX6O95503 412 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 UROSP10746 265 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 GLULP15104 373 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 IMPDH1P20839 514 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 ADRA1AP35348 466 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 ARCN1P48444 511 aaKnown RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 PLA2G16P53816 162 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 FBXW4P57775 412 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 NDUFA9Q16795 377 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 CLHC1Q8NHS4 586 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 LPGAT1Q92604 370 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 PRKAG3Q9UGI9 489 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 A8MU76 341 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 NARSO43776 548 aaKnown RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 CCND1P24385 295 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 OPRD1P41143 372 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 HK2P52789 917 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 CDKN2DP55273 166 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 POLE2P56282 527 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 SIM2Q14190 667 aaPredicted RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 CCNYL2Q5T2Q4 361 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 KCTD11Q693B1 232 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 PNCKQ6P2M8 343 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 BNC2Q6ZN30 1099 aaPredicted RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 ZNF781Q8N8C0 355 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 MAPK15Q8TD08 544 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 CDK15Q96Q40 435 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 EFCAB11Q9BUY7 163 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 POPDC3Q9HBV1 291 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 MAPRE3Q9UPY8 281 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 CA5BQ9Y2D0 317 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 POLR3HQ9Y535 204 aaPredicted RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 OR5K4A6NMS3 321 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 RFPL1O75677 317 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 ENO2P09104 434 aaPredicted RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 KRT20P35900 424 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 CAMK1Q14012 370 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 SLBPQ14493 270 aaKnown RBP eCLIP9.88□□□□□ -0.83
SMG6-213ENST00000573166 IRF4Q15306 451 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 MAPKAPK3Q16644 382 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 NAIF1Q69YI7 327 aaPredicted RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 ASTLQ6HA08 431 aaPredicted RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 RIPOR1Q6ZS17 1223 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 RFLNAQ6ZTI6 216 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 CEP97Q8IW35 865 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 OR13J1Q8NGT2 312 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 ZFRQ96KR1 1074 aaKnown RBP9.88□□□□□ -0.83
SMG6-213ENST00000573166 OXSMQ9NWU1 459 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 HRASLS2Q9NWW9 162 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 SELENONQ9NZV5 590 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 CROTQ9UKG9 612 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 GPR34Q9UPC5 381 aa9.88□□□□□ -0.83
SMG6-213ENST00000573166 DTNAQ9Y4J8 743 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms