RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 COILP38432 576 aaPredicted RBP16.75■□□□□ 0.27
SMG6-212ENST00000573153 KCNAB2Q13303 367 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 KRT33BQ14525 404 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 CTSL3PQ5NE16 218 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 PLEKHS1Q5SXH7 462 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 CDHR3Q6ZTQ4 885 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 TRIM73Q86UV7 250 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 CAND1Q86VP6 1230 aaKnown RBP16.75■□□□□ 0.27
SMG6-212ENST00000573153 KRT222Q8N1A0 295 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 LINC01555Q8NAE3 123 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 MAGOHBQ96A72 148 aaKnown RBP16.75■□□□□ 0.27
SMG6-212ENST00000573153 KLHL25Q9H0H3 589 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 SLC25A18Q9H1K4 315 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 KCND1Q9NSA2 647 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 PADI1Q9ULC6 663 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 PLAGL1Q9UM63 463 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 SNX12Q9UMY4 172 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 SOX13Q9UN79 622 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 ASF1AQ9Y294 204 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 PCDHB3Q9Y5E6 796 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 KCNMB2Q9Y691 235 aa16.75■□□□□ 0.27
SMG6-212ENST00000573153 GSAPA4D1B5 854 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 PRMT5O14744 637 aaPredicted RBP16.74■□□□□ 0.27
SMG6-212ENST00000573153 CD3EAPO15446 510 aaKnown RBP16.74■□□□□ 0.27
SMG6-212ENST00000573153 SUV39H1O43463 412 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 KIF5CO60282 957 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 SCRG1O75711 98 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 SLCO2B1O94956 709 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 ZIC2O95409 532 aaPredicted RBP16.74■□□□□ 0.27
SMG6-212ENST00000573153 RECKO95980 971 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 UGT2B7P16662 529 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 TCN2P20062 427 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 RPS3P23396 243 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMG6-212ENST00000573153 AOAHP28039 575 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 PKLRP30613 574 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 GCGRP47871 477 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 FNTAP49354 379 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 RPS18P62269 152 aaKnown RBP16.74■□□□□ 0.27
SMG6-212ENST00000573153 SARNPP82979 210 aaKnown RBP16.74■□□□□ 0.27
SMG6-212ENST00000573153 GPS1Q13098 491 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 IL10RAQ13651 578 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 GBX1Q14549 363 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 TYSND1Q2T9J0 566 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 ARMC6Q6NXE6 501 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 CCDC137Q6PK04 289 aaKnown RBP16.74■□□□□ 0.27
SMG6-212ENST00000573153 SPESP1Q6UW49 350 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 FAM198BQ6UWH4 519 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 CES3Q6UWW8 571 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 LRRC6Q86X45 466 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 SPNS2Q8IVW8 549 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 LMNTD1Q8N9Z9 388 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 MCUQ8NE86 351 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 OR8K5Q8NH50 307 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 COG1Q8WTW3 980 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 CPT1BQ92523 772 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 BIRC8Q96P09 236 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 ARHGAP9Q9BRR9 750 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 TSSK1BQ9BXA7 367 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 CHRNA10Q9GZZ6 450 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 PCMTD2Q9NV79 361 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 POLG2Q9UHN1 485 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 ANAPC5Q9UJX4 755 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 SPTA1P02549 2419 aa16.74■□□□□ 0.27
SMG6-212ENST00000573153 C2orf74A8MZ97 194 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 C21orf140B9A014 251 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 J3QKU1 62 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 K7EM74 188 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 CPNE3O75131 537 aaKnown RBP16.73■□□□□ 0.27
SMG6-212ENST00000573153 PHF2O75151 1096 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 AVILO75366 819 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 CREG1O75629 220 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 MT-ND3P03897 115 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 CHRM5P08912 532 aaPredicted RBP16.73■□□□□ 0.27
SMG6-212ENST00000573153 MAGEA3P43357 314 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 PRKAA1Q13131 559 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 TRIP13Q15645 432 aaPredicted RBP16.73■□□□□ 0.27
SMG6-212ENST00000573153 DEFB109BQ30KR1 87 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 DNAJC21Q5F1R6 531 aaKnown RBP16.73■□□□□ 0.27
SMG6-212ENST00000573153 KIAA0930Q6ICG6 404 aaPredicted RBP16.73■□□□□ 0.27
SMG6-212ENST00000573153 C16orf46Q6P387 395 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 DSELQ8IZU8 1212 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 ADAMTS17Q8TE56 1095 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 ASZ1Q8WWH4 475 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 ACTL8Q9H568 366 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 SOHLH2Q9NX45 425 aa16.73■□□□□ 0.27
SMG6-212ENST00000573153 PIPSLA2A3N6 862 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 PRICKLE3O43900 615 aaPredicted RBP16.72■□□□□ 0.27
SMG6-212ENST00000573153 SHMT2P34897 504 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 CCR10P46092 362 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 CSE1LP55060 971 aaKnown RBP16.72■□□□□ 0.27
SMG6-212ENST00000573153 ADARP55265 1226 aaKnown RBP16.72■□□□□ 0.27
SMG6-212ENST00000573153 MC1RQ01726 317 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 ERV3-1Q14264 604 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 KYNUQ16719 465 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 SYTL3Q4VX76 610 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 IZUMO3Q5VZ72 239 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 C19orf47Q8N9M1 422 aaKnown RBP16.72■□□□□ 0.27
SMG6-212ENST00000573153 GRK7Q8WTQ7 553 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 LPGAT1Q92604 370 aa16.72■□□□□ 0.27
SMG6-212ENST00000573153 TCF12Q99081 682 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms